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James P. Balhoff
James P. Balhoff
Renaissance Computing Institute (RENCI), University of North Carolina at Chapel Hill
Bestätigte E-Mail-Adresse bei renci.org
Titel
Zitiert von
Zitiert von
Jahr
The gene ontology resource: 20 years and still GOing strong
Gene Ontology Consortium
Nucleic acids research 47 (D1), D330-D338, 2019
34872019
The Gene Ontology resource: enriching a GOld mine
Nucleic acids research 49 (D1), D325-D334, 2021
24932021
Expansion of the Gene Ontology knowledgebase and resources
GO Consortium
Nucleic Acids Research 45 (D1), D331-D338, 2017
1739*2017
The evolution of transcriptional regulation in eukaryotes
GA Wray, MW Hahn, E Abouheif, JP Balhoff, M Pizer, MV Rockman, ...
Molecular biology and evolution 20 (9), 1377-1419, 2003
13972003
Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources
S Köhler, L Carmody, N Vasilevsky, JOB Jacobsen, D Danis, JP Gourdine, ...
Nucleic acids research 47 (D1), D1018-D1027, 2019
6672019
The Monarch Initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species
CJ Mungall, JA McMurry, S Köhler, JP Balhoff, C Borromeo, M Brush, ...
Nucleic acids research 45 (D1), D712-D722, 2017
2992017
The gene ontology knowledgebase in 2023
SA Aleksander, J Balhoff, S Carbon, JM Cherry, HJ Drabkin, D Ebert, ...
Genetics 224 (1), iyad031, 2023
2642023
Finding our way through phenotypes
AR Deans, SE Lewis, E Huala, SS Anzaldo, M Ashburner, JP Balhoff, ...
PLoS biology 13 (1), e1002033, 2015
2292015
The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species
KA Shefchek, NL Harris, M Gargano, N Matentzoglu, D Unni, M Brush, ...
Nucleic acids research 48 (D1), D704-D715, 2020
1992020
Development and application of a phylogenomic toolkit: resolving the evolutionary history of Madagascar’s lemurs
JE Horvath, DW Weisrock, SL Embry, I Fiorentino, JP Balhoff, P Kappeler, ...
Genome Research 18 (3), 489-499, 2008
1932008
Time to change how we describe biodiversity
AR Deans, MJ Yoder, JP Balhoff
Trends in ecology & evolution 27 (2), 78-84, 2012
1692012
ROBOT: a tool for automating ontology workflows
RC Jackson, JP Balhoff, E Douglass, NL Harris, CJ Mungall, JA Overton
BMC bioinformatics 20, 1-10, 2019
1452019
Unification of multi-species vertebrate anatomy ontologies for comparative biology in Uberon
MA Haendel, JP Balhoff, FB Bastian, DC Blackburn, JA Blake, Y Bradford, ...
Journal of biomedical semantics 5, 1-13, 2014
1402014
OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies
R Jackson, N Matentzoglu, JA Overton, R Vita, JP Balhoff, PL Buttigieg, ...
Database 2021, baab069, 2021
1252021
The gene ontology knowledgebase in 2023
C Gene Ontology, SA Aleksander, J Balhoff, S Carbon, JM Cherry, ...
Genetics 224 (1), iyad031, 2023
1142023
NeXML: rich, extensible, and verifiable representation of comparative data and metadata
RA Vos, JP Balhoff, JA Caravas, MT Holder, H Lapp, WP Maddison, ...
Systematic biology 61 (4), 675-689, 2012
1052012
Evolutionary characters, phenotypes and ontologies: curating data from the systematic biology literature
WM Dahdul, JP Balhoff, J Engeman, T Grande, EJ Hilton, C Kothari, ...
PLoS One 5 (5), e10708, 2010
1042010
The teleost anatomy ontology: anatomical representation for the genomics age
WM Dahdul, JG Lundberg, PE Midford, JP Balhoff, H Lapp, TJ Vision, ...
Systematic biology 59 (4), 369-383, 2010
1022010
Phenex: ontological annotation of phenotypic diversity
JP Balhoff, WM Dahdul, CR Kothari, H Lapp, JG Lundberg, P Mabee, ...
PLoS One 5 (5), e10500, 2010
1012010
KG-COVID-19: a framework to produce customized knowledge graphs for COVID-19 response
JT Reese, D Unni, TJ Callahan, L Cappelletti, V Ravanmehr, S Carbon, ...
Patterns 2 (1), 2021
912021
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