A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium Nature biotechnology 32 (9), 903-914, 2014 | 887 | 2014 |
The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons I Braasch, AR Gehrke, JJ Smith, K Kawasaki, T Manousaki, J Pasquier, ... Nature genetics 48 (4), 427-437, 2016 | 599 | 2016 |
Assessing technical performance in differential gene expression experiments with external spike-in RNA control ratio mixtures SA Munro, SP Lund, PS Pine, H Binder, DA Clevert, A Conesa, J Dopazo, ... Nature communications 5 (1), 5125, 2014 | 131 | 2014 |
DARIO: a ncRNA detection and analysis tool for next-generation sequencing experiments M Fasold, D Langenberger, H Binder, PF Stadler, S Hoffmann Nucleic acids research 39 (suppl_2), W112-W117, 2011 | 114 | 2011 |
Comparison of splice sites reveals that long noncoding RNAs are evolutionarily well conserved A Nitsche, D Rose, M Fasold, K Reiche, PF Stadler Rna 21 (5), 801-812, 2015 | 109 | 2015 |
Third Report on Chicken Genes and Chromosomes 2015Prepared by M Schmid, J Smith, DW Burt, BL Aken, PB Antin, AL Archibald, C Ashwell, ... Cytogenetic and genome research 145 (2), 78-179, 2015 | 98 | 2015 |
Portraying the expression landscapes of cancer subtypes: A case study of glioblastoma multiforme and prostate cancer L Hopp, H Wirth, M Fasold, H Binder Systems Biomedicine 1 (2), 99-121, 2013 | 45 | 2013 |
Conservation and losses of non-coding RNAs in avian genomes PP Gardner, M Fasold, SW Burge, M Ninova, J Hertel, S Kehr, TE Steeves, ... PloS one 10 (3), e0121797, 2015 | 24 | 2015 |
Estimating RNA-quality using GeneChip microarrays M Fasold, H Binder BMC genomics 13, 1-25, 2012 | 24 | 2012 |
G-stack modulated probe intensities on expression arrays-sequence corrections and signal calibration M Fasold, PF Stadler, H Binder BMC bioinformatics 11, 1-24, 2010 | 24 | 2010 |
plantDARIO: web based quantitative and qualitative analysis of small RNA-seq data in plants D Patra, M Fasold, D Langenberger, G Steger, I Grosse, PF Stadler Frontiers in plant science 5, 708, 2014 | 22 | 2014 |
Nimodipine enhances neurite outgrowth in dopaminergic brain slice co-cultures K Sygnecka, C Heine, N Scherf, M Fasold, H Binder, C Scheller, H Franke International Journal of Developmental Neuroscience 40, 1-11, 2015 | 21 | 2015 |
Manipulating base quality scores enables variant calling from bisulfite sequencing alignments using conventional Bayesian approaches A Nunn, C Otto, M Fasold, PF Stadler, D Langenberger BMC genomics 23 (1), 477, 2022 | 18 | 2022 |
AffyRNADegradation: control and correction of RNA quality effects in GeneChip expression data M Fasold, H Binder Bioinformatics 29 (1), 129-131, 2013 | 18 | 2013 |
EpiDiverse Toolkit: a pipeline suite for the analysis of bisulfite sequencing data in ecological plant epigenetics A Nunn, SN Can, C Otto, M Fasold, B Díez Rodríguez, N Fernández-Pozo, ... NAR genomics and bioinformatics 3 (4), lqab106, 2021 | 17 | 2021 |
Variation of RNA quality and quantity are major sources of batch effects in microarray expression data M Fasold, H Binder Microarrays 3 (4), 322-339, 2014 | 13 | 2014 |
Mismatch and G-stack modulated probe signals on SNP microarrays H Binder, M Fasold, T Glomb PLoS One 4 (11), e7862, 2009 | 12 | 2009 |
Molecular phenotypic portraits-Exploring the ‘OMES’with individual resolution H Binder, L Hopp, V Cakir, M Fasold, M von Bergen, H Wirth Proceedings of the 6th International Symposium on Health Informatics and …, 2011 | 9 | 2011 |
Introducing evolutionary biologists to the analysis of big data: guidelines to organize extended bioinformatics training courses R Faria, D Triant, A Perdomo-Sabogal, B Overduin, C Bleidorn, ... Evolution: Education and Outreach 11 (1), 1-10, 2018 | 4 | 2018 |
Validation of QTL affecting mastitis in dairy cattle J Vilkki, M Dolezal, G Sahana, A Bagnato, M Fasold, T Iso-Touru, F Panitz, ... Book of abstracts of the 64th annual meeting of the European Federation of …, 2013 | 2 | 2013 |