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Manuel Garber
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Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
M Guttman, I Amit, M Garber, C French, MF Lin, D Feldser, M Huarte, ...
Nature 458 (7235), 223-227, 2009
47692009
Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression
AM Khalil, M Guttman, M Huarte, M Garber, A Raj, D Rivea Morales, ...
Proceedings of the National Academy of Sciences 106 (28), 11667-11672, 2009
32592009
Genome sequence, comparative analysis and haplotype structure of the domestic dog
K Lindblad-Toh, CM Wade, TS Mikkelsen, EK Karlsson, DB Jaffe, ...
Nature 438 (7069), 803-819, 2005
31022005
A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response
M Huarte, M Guttman, D Feldser, M Garber, MJ Koziol, ...
Cell 142 (3), 409-419, 2010
23892010
SARS-CoV-2 receptor ACE2 is an interferon-stimulated gene in human airway epithelial cells and is detected in specific cell subsets across tissues
CGK Ziegler, SJ Allon, SK Nyquist, IM Mbano, VN Miao, CN Tzouanas, ...
Cell 181 (5), 1016-1035. e19, 2020
23372020
lincRNAs act in the circuitry controlling pluripotency and differentiation
M Guttman, J Donaghey, BW Carey, M Garber, JK Grenier, G Munson, ...
Nature 477 (7364), 295-300, 2011
21572011
Ab initio reconstruction of cell type–specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs
M Guttman, M Garber, JZ Levin, J Donaghey, J Robinson, X Adiconis, ...
Nature biotechnology 28 (5), 503-510, 2010
14762010
Computational methods for transcriptome annotation and quantification using RNA-seq
M Garber, MG Grabherr, M Guttman, C Trapnell
Nature methods 8 (6), 469-477, 2011
12882011
A high-resolution map of human evolutionary constraint using 29 mammals
K Lindblad-Toh, M Garber, O Zuk, MF Lin, BJ Parker, S Washietl, ...
Nature 478 (7370), 476-482, 2011
12602011
Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals
U Sharma, CC Conine, JM Shea, A Boskovic, AG Derr, XY Bing, ...
Science 351 (6271), 391-396, 2016
11272016
Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells
S Loewer, MN Cabili, M Guttman, YH Loh, K Thomas, IH Park, M Garber, ...
Nature genetics 42 (12), 1113-1117, 2010
10782010
Genome sequence, comparative analysis, and population genetics of the domestic horse
CM Wade, E Giulotto, S Sigurdsson, M Zoli, S Gnerre, F Imsland, TL Lear, ...
Science 326 (5954), 865-867, 2009
8862009
Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis
A Pauli, E Valen, MF Lin, M Garber, NL Vastenhouw, JZ Levin, L Fan, ...
Genome research 22 (3), 577-591, 2012
8302012
Functional annotation of native enhancers with a Cas9–histone demethylase fusion
NA Kearns, H Pham, B Tabak, RM Genga, NJ Silverstein, M Garber, ...
Nature methods 12 (5), 401-403, 2015
8152015
Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences
TS Mikkelsen, MJ Wakefield, B Aken, CT Amemiya, JL Chang, S Duke, ...
Nature 447 (7141), 167-177, 2007
7742007
Higher-order inter-chromosomal hubs shape 3D genome organization in the nucleus
SA Quinodoz, N Ollikainen, B Tabak, A Palla, JM Schmidt, E Detmar, ...
Cell 174 (3), 744-757. e24, 2018
7282018
Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells
M Rabani, JZ Levin, L Fan, X Adiconis, R Raychowdhury, M Garber, ...
Nature biotechnology 29 (5), 436-442, 2011
6262011
A composite of multiple signals distinguishes causal variants in regions of positive selection
SR Grossman, I Shylakhter, EK Karlsson, EH Byrne, S Morales, G Frieden, ...
Science 327 (5967), 883-886, 2010
5722010
Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses
I Amit, M Garber, N Chevrier, AP Leite, Y Donner, T Eisenhaure, ...
Science 326 (5950), 257-263, 2009
5582009
Identifying novel constrained elements by exploiting biased substitution patterns
M Garber, M Guttman, M Clamp, MC Zody, N Friedman, X Xie
Bioinformatics 25 (12), i54-i62, 2009
4172009
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