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Brad T Sherman
Brad T Sherman
Laboratory of Human Retrovirology and Immunoinformatics (LHRI); Frederick National Laboratories for
Verified email at mail.nih.gov - Homepage
Title
Cited by
Cited by
Year
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
DW Huang, BT Sherman, RA Lempicki
Nature protocols 4 (1), 44-57, 2009
216952009
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
DW Huang, BT Sherman, RA Lempicki
Nucleic acids research 37 (1), 1-13, 2009
129502009
DAVID: database for annotation, visualization, and integrated discovery
G Dennis, BT Sherman, DA Hosack, J Yang, W Gao, HC Lane, ...
Genome biology 4 (9), 1-11, 2003
104052003
The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists
DW Huang, BT Sherman, Q Tan, JR Collins, WG Alvord, J Roayaei, ...
Genome Biology 8 (9), R183, 2007
23952007
Identifying biological themes within lists of genes with EASE
DA Hosack, G Dennis, BT Sherman, HC Lane, RA Lempicki
Genome biology 4 (10), 1-8, 2003
22292003
DAVID: a web server for functional enrichment analysis and functional annotation of gene lists (2021 update)
BT Sherman, M Hao, J Qiu, X Jiao, MW Baseler, HC Lane, T Imamichi, ...
Nucleic acids research 50 (W1), W216-W221, 2022
20062022
DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists
DW Huang, BT Sherman, Q Tan, J Kir, D Liu, D Bryant, Y Guo, ...
Nucleic acids research 35 (suppl_2), W169-W175, 2007
18972007
DAVID-WS: a stateful web service to facilitate gene/protein list analysis
X Jiao, BT Sherman, DW Huang, R Stephens, MW Baseler, HC Lane, ...
Bioinformatics 28 (13), 1805-1806, 2012
10502012
DAVID Knowledgebase: a gene-centered database integrating heterogeneous gene annotation resources to facilitate high-throughput gene functional analysis
BT Sherman, DW Huang, Q Tan, Y Guo, S Bour, D Liu, R Stephens, ...
BMC bioinformatics 8, 1-11, 2007
5762007
Extracting biological meaning from large gene lists with DAVID
DW Huang, BT Sherman, X Zheng, J Yang, T Imamichi, R Stephens, ...
Current protocols in bioinformatics 27 (1), 13.11. 1-13.11. 13, 2009
4292009
DAVID gene ID conversion tool
DW Huang, BT Sherman, R Stephens, MW Baseler, HC Lane, ...
Bioinformation 2 (10), 428, 2008
1892008
Defective HIV-1 proviruses produce viral proteins
H Imamichi, M Smith, JW Adelsberger, T Izumi, F Scrimieri, BT Sherman, ...
Proceedings of the National Academy of Sciences 117 (7), 3704-3710, 2020
1792020
Genome analysis of three Pneumocystis species reveals adaptation mechanisms to life exclusively in mammalian hosts
L Ma, Z Chen, DW Huang, G Kutty, M Ishihara, H Wang, A Abouelleil, ...
Nature communications 7 (1), 10740, 2016
1742016
Longitudinal HIV sequencing reveals reservoir expression leading to decay which is obscured by clonal expansion
MR Pinzone, DJ VanBelzen, S Weissman, MP Bertuccio, LM Cannon, ...
Nature communications 10 (1), 1-12, 2019
1552019
STING is an essential mediator of the Ku70-mediated production of IFN-λ1 in response to exogenous DNA
H Sui, M Zhou, H Imamichi, X Jiao, BT Sherman, HC Lane, T Imamichi
Science signaling 10 (488), eaah5054, 2017
1172017
Gene duplications in prokaryotes can be associated with environmental adaptation
MS Bratlie, J Johansen, BT Sherman, DW Huang, RA Lempicki, F Drabløs
BMC genomics 11 (1), 1-17, 2010
1142010
A benchmark study on error assessment and quality control of CCS reads derived from the PacBio RS
X Jiao, X Zheng, L Ma, G Kutty, E Gogineni, Q Sun, BT Sherman, X Hu, ...
Journal of data mining in genomics & proteomics 4 (3), 2013
832013
Evolution of the pygmy phenotype: Evidence of positive selection from genome-wide scans in African, Asian, and Melanesian pygmies
AB Migliano, IG Romero, M Metspalu, M Leavesley, L Pagani, T Antao, ...
Human biology 85 (1-3), 251-284, 2013
732013
Sequencing and characterization of the complete mitochondrial genomes of three Pneumocystis species provide new insights into divergence between human and rodent Pneumocystis
L Ma, DW Huang, CA Cuomo, S Sykes, G Fantoni, B Das, BT Sherman, ...
The FASEB Journal 27 (5), 1962-1972, 2013
532013
Interleukin-15 (IL-15) Strongly Correlates with Increasing HIV-1 Viremia and Markers of Inflammation
S Swaminathan, J Qiu, AW Rupert, Z Hu, J Higgins, RL Dewar, R Stevens, ...
PLOS ONE 11 (11), e0167091, 2016
492016
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