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Clémence Frioux
Clémence Frioux
Inria, Univ. Bordeaux, INRAE, 33400 Talence, France
Bestätigte E-Mail-Adresse bei inria.fr - Startseite
Titel
Zitiert von
Zitiert von
Jahr
Traceability, reproducibility and wiki-exploration for “à-la-carte” reconstructions of genome-scale metabolic models
M Aite, M Chevallier, C Frioux, C Trottier, J Got, MP Cortés, SN Mendoza, ...
PLoS computational biology 14 (5), e1006146, 2018
1052018
Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks
S Prigent, C Frioux, SM Dittami, S Thiele, A Larhlimi, G Collet, F Gutknecht, ...
PLOS Computational Biology 13 (1), e1005276, 2017
882017
Dispersal strategies shape persistence and evolution of human gut bacteria
F Hildebrand, TI Gossmann, C Frioux, E Özkurt, PN Myers, P Ferretti, ...
Cell host & microbe 29 (7), 1167-1176. e9, 2021
772021
From bag-of-genes to bag-of-genomes: metabolic modelling of communities in the era of metagenome-assembled genomes
C Frioux, D Singh, T Korcsmaros, F Hildebrand
Computational and Structural Biotechnology Journal 18, 1722-1734, 2020
712020
Metage2Metabo, microbiota-scale metabolic complementarity for the identification of key species
A Belcour, C Frioux, M Aite, A Bretaudeau, F Hildebrand, A Siegel
Elife 9, e61968, 2020
572020
Metagenomic assessment of the global diversity and distribution of bacteria and fungi
M Bahram, T Netherway, C Frioux, P Ferretti, LP Coelho, S Geisen, P Bork, ...
Environmental Microbiology 23 (1), 316-326, 2021
552021
Metabolic complementarity between a brown alga and associated 1 cultivable bacteria provide indications of beneficial interactions
B Burgunter-Delamare, H Kleinjan, C Frioux, E Fremy, SM Dittami, ...
Frontiers in Marine Science, 2020
382020
Scalable and exhaustive screening of metabolic functions carried out by microbial consortia
C Frioux, E Fremy, C Trottier, A Siegel
Bioinformatics 34 (17), i934-i943, 2018
312018
The genome of Ectocarpus subulatus–A highly stress-tolerant brown alga
SM Dittami, E Corre, L Brillet-Guéguen, AP Lipinska, N Pontoizeau, M Aite, ...
Marine Genomics 52, 100740, 2020
302020
Genome–Scale Metabolic Networks Shed Light on the Carotenoid Biosynthesis Pathway in the Brown Algae Saccharina japonica and Cladosiphon okamuranus
D Nègre, M Aite, A Belcour, C Frioux, L Brillet-Guéguen, X Liu, P Bordron, ...
Antioxidants 8 (11), 564, 2019
222019
Crystal structure and biochemical characterization of a manganese superoxide dismutase from Chaetomium thermophilum
T Haikarainen, C Frioux, LQ Zhnag, DC Li, AC Papageorgiou
Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1844 (2), 422-429, 2014
192014
Hybrid Metabolic Network Completion
C Frioux, T Schaub, S Schellhorn, A Siegel, P Wanko
International Conference on Logic Programming and Nonmonotonic Reasoning …, 2017
182017
Enterosignatures define common bacterial guilds in the human gut microbiome
C Frioux, R Ansorge, E Özkurt, CG Nedjad, J Fritscher, C Quince, ...
Cell Host & Microbe, 2023
152023
The functional microbiome of grapevine throughout plant evolutionary history and lifetime
P Fournier, L Pellan, D Barroso-Bergadà, DA Bohan, T Candresse, ...
Advances in Ecological Research 67, 27-99, 2022
112022
Robustness analysis of metabolic predictions in algal microbial communities based on different annotation pipelines
E Karimi, E Geslain, A Belcour, C Frioux, M Aïte, A Siegel, E Corre, ...
PeerJ 9, e11344, 2021
92021
Combining graph and flux-based structures to decipher phenotypic essential metabolites within metabolic networks
J Laniau, C Frioux, J Nicolas, C Baroukh, MP Cortes, J Got, C Trottier, ...
PeerJ 5, e3860, 2017
82017
Inferring and comparing metabolism across heterogeneous sets of annotated genomes using AuCoMe
A Belcour, J Got, M Aite, L Delage, J Collén, C Frioux, C Leblanc, ...
Genome Research 33 (6), 972-987, 2023
7*2023
Insights into the potential for mutualistic and harmful host–microbe interactions affecting brown alga freshwater acclimation
H KleinJan, C Frioux, G Califano, M Aite, E Fremy, E Karimi, E Corre, ...
Molecular Ecology 32 (3), 703-723, 2023
42023
Using automated reasoning to explore the metabolism of unconventional organisms: a first step to explore host–microbial interactions
C Frioux, SM Dittami, A Siegel
Biochemical Society Transactions 48 (3), 901-913, 2020
42020
Accelerating metabolic models evaluation with statistical metamodels: application to Salmonella infection models
C Frioux, S Huet, S Labarthe, J Martinelli, T Malou, D Sherman, ...
ESAIM: Proceedings and Surveys 73, 187-217, 2023
32023
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