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Burkhard Morgenstern
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Year
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana.
Arabidopsis Genome Initiative
Nature 408 (6814), 796, 2000
104732000
The genome of the model beetle and pest Tribolium castaneum
Tribolium Genome Sequencing Consortium
Nature 452 (7190), 949, 2008
1307*2008
AUGUSTUS: ab initio prediction of alternative transcripts
M Stanke, O Keller, I Gunduz, A Hayes, S Waack, B Morgenstern
Nucleic acids research 34 (suppl_2), W435-W439, 2006
12992006
MIPS: a database for genomes and protein sequences
HW Mewes, D Frishman, U Güldener, G Mannhaupt, K Mayer, M Mokrejs, ...
Nucleic acids research 30 (1), 31-34, 2002
11672002
AUGUSTUS: a web server for gene finding in eukaryotes
M Stanke, R Steinkamp, S Waack, B Morgenstern
Nucleic acids research 32 (suppl_2), W309-W312, 2004
10292004
AUGUSTUS: a web server for gene prediction in eukaryotes that allows user-defined constraints
M Stanke, B Morgenstern
Nucleic acids research 33 (suppl_2), W465-W467, 2005
10252005
DIALIGN 2: improvement of the segment-to-segment approach to multiple sequence alignment.
B Morgenstern
Bioinformatics (Oxford, England) 15 (3), 211-218, 1999
9211999
Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources
M Stanke, O Schöffmann, B Morgenstern, S Waack
BMC bioinformatics 7, 62, 2006
8442006
Comparative analysis of the complete genome sequence of the plant growth–promoting bacterium Bacillus amyloliquefaciens FZB42
XH Chen, A Koumoutsi, R Scholz, A Eisenreich, K Schneider, ...
Nature biotechnology 25 (9), 1007-1014, 2007
8152007
Phylogenomics revives traditional views on deep animal relationships
H Philippe, R Derelle, P Lopez, K Pick, C Borchiellini, N Boury-Esnault, ...
Current Biology 19 (8), 706-712, 2009
7192009
DIALIGN: finding local similarities by multiple sequence alignment.
B Morgenstern, K Frech, A Dress, T Werner
Bioinformatics (Oxford, England) 14 (3), 290-294, 1998
5151998
Multiple DNA and protein sequence alignment based on segment-to-segment comparison
B Morgenstern, A Dress, T Werner
Proceedings of the National Academy of Sciences 93 (22), 12098-12103, 1996
4351996
Improved phylogenomic taxon sampling noticeably affects nonbilaterian relationships
KS Pick, H Philippe, F Schreiber, D Erpenbeck, DJ Jackson, P Wrede, ...
Molecular biology and evolution 27 (9), 1983-1987, 2010
3582010
DIALIGN: multiple DNA and protein sequence alignment at BiBiServ
B Morgenstern
Nucleic acids research 32 (suppl_2), W33-W36, 2004
3072004
DIALIGN-TX: greedy and progressive approaches for segment-based multiple sequence alignment
AR Subramanian, M Kaufmann, B Morgenstern
Algorithms Mol Biol 3 (6), 2008
2952008
AUGUSTUS at EGASP: using EST, protein and genomic alignments for improved gene prediction in the human genome
M Stanke, A Tzvetkova, B Morgenstern
Genome Biol 7 (Suppl 1), S11, 2006
2802006
DIALIGN-T: an improved algorithm for segment-based multiple sequence alignment
AR Subramanian, J Weyer-Menkhoff, M Kaufmann, B Morgenstern
BMC bioinformatics 6, 66, 2005
2272005
Fast and sensitive multiple alignment of large genomic sequences
M Brudno, M Chapman, B Göttgens, S Batzoglou, B Morgenstern
BMC bioinformatics 4 (1), 66, 2003
2272003
Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems
C Schmeisser, H Liesegang, D Krysciak, N Bakkou, A Le Quéré, ...
Applied and environmental microbiology 75 (12), 4035-4045, 2009
1812009
jpHMM: Improving the reliability of recombination prediction in HIV-1
AK Schultz, M Zhang, I Bulla, T Leitner, B Korber, B Morgenstern, ...
Nucleic acids research 37 (suppl_2), W647-W651, 2009
1542009
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