| Using a linkage mapping approach to identify QTL for day‐neutrality in the octoploid strawberry CK Weebadde, D Wang, CE Finn, KS Lewers, JJ Luby, J Bushakra, ... Plant breeding 127 (1), 94-101, 2008 | 135 | 2008 |
| The genome of black raspberry (Rubus occidentalis) R VanBuren, D Bryant, JM Bushakra, KJ Vining, PP Edger, ER Rowley, ... The Plant Journal 87 (6), 535-547, 2016 | 128 | 2016 |
| Comparative analysis of rosaceous genomes and the reconstruction of a putative ancestral genome for the family E Illa, DJ Sargent, EL Girona, J Bushakra, A Cestaro, R Crowhurst, ... BMC Evolutionary biology 11, 1-13, 2011 | 119 | 2011 |
| QTL analysis and candidate gene mapping for skin and flesh color in sweet cherry fruit (Prunus avium L.) SS Sooriyapathirana, A Khan, AM Sebolt, D Wang, JM Bushakra, ... Tree genetics & genomes 6, 821-832, 2010 | 106 | 2010 |
| A near complete, chromosome-scale assembly of the black raspberry (Rubus occidentalis) genome R VanBuren, CM Wai, M Colle, J Wang, S Sullivan, JM Bushakra, ... Gigascience 7 (8), giy094, 2018 | 96 | 2018 |
| Construction of black (Rubus occidentalis) and red (R. idaeus) raspberry linkage maps and their comparison to the genomes of strawberry, apple, and peach JM Bushakra, MJ Stephens, AN Atmadjaja, KS Lewers, VV Symonds, ... Theoretical and Applied Genetics 125, 311-327, 2012 | 66 | 2012 |
| Chromosome-scale scaffolding of the black raspberry (Rubus occidentalis L.) genome based on chromatin interaction data R Jibran, H Dzierzon, N Bassil, JM Bushakra, PP Edger, S Sullivan, ... Horticulture research 5, 2018 | 54 | 2018 |
| Target Capture Sequencing Unravels Rubus Evolution KA Carter, A Liston, NV Bassil, LA Alice, JM Bushakra, BL Sutherland, ... Frontiers in plant science 10, 1615, 2019 | 53 | 2019 |
| Genetic mapping of day-neutrality in cultivated strawberry P Castro, JM Bushakra, P Stewart, CK Weebadde, D Wang, JF Hancock, ... Molecular Breeding 35, 1-16, 2015 | 53 | 2015 |
| A genetic linkage map of black raspberry (Rubus occidentalis) and the mapping of Ag 4 conferring resistance to the aphid Amphorophora agathonica JM Bushakra, DW Bryant, M Dossett, KJ Vining, R VanBuren, BS Gilmore, ... Theoretical and Applied Genetics 128, 1631-1646, 2015 | 47 | 2015 |
| The extent of clonality and genetic diversity in the Santa Cruz Island ironwood, Lyonothamnus floribundus JM Bushakra, SA Hodges, JB Cooper, DD Kaska Molecular Ecology 8 (3), 471-475, 1999 | 46 | 1999 |
| Developing expressed sequence tag libraries and the discovery of simple sequence repeat markers for two species of raspberry (Rubus L.) JM Bushakra, KS Lewers, ME Staton, T Zhebentyayeva, CA Saski BMC plant biology 15, 1-11, 2015 | 24 | 2015 |
| QTL involved in the modification of cyanidin compounds in black and red raspberry fruit JM Bushakra, C Krieger, D Deng, MJ Stephens, AC Allan, R Storey, ... Theoretical and applied genetics 126, 847-865, 2013 | 20 | 2013 |
| Rosaceae conserved orthologous set (RosCOS) markers as a tool to assess genome synteny between Malus and Fragaria JM Bushakra, DJ Sargent, A Cabrera, R Crowhurst, EL Girona, R Velasco, ... Tree genetics & genomes 8, 643-658, 2012 | 20 | 2012 |
| Development and transferability of black and red raspberry microsatellite markers from short-read sequences M Dossett, JM Bushakra, B Gilmore, CA Koch, C Kempler, CE Finn, ... Journal of the American Society for Horticultural Science 140 (3), 243-252, 2015 | 11 | 2015 |
| Characterization of aphid resistance loci in black raspberry (Rubus occidentalis L.) JM Bushakra, M Dossett, KA Carter, KJ Vining, JC Lee, DW Bryant, ... Molecular Breeding 38, 1-19, 2018 | 10 | 2018 |
| Identification of QTL associated with flower and runner production in octoploid strawberry (Fragaria× ananassa) SS Sooriyapathirana, S Mookerjee, CK Weebadde, CE Finn, K Lewers, ... Journal of Berry Research 5 (3), 107-116, 2015 | 9 | 2015 |
| North American Crop Wild Relatives of Temperate Berries (Fragaria L., Ribes L., Rubus L., and Vaccinium L.) KE Hummer, KA Williams, JM Bushakra North American Crop Wild Relatives, Volume 2: Important Species, 283-327, 2019 | 8 | 2019 |
| Sequence and Analysis of the Black Raspberry (Rubus occidentalis) Genome R VanBuren, D Bryant, JM Bushakra, KJ Vining, S Filichkin, PP Edger, ... The Genomes of Rosaceous Berries and Their Wild Relatives, 185-197, 2018 | 6 | 2018 |
| Comparative RNA-seq for the investigation of tolerance to Verticillium wilt in black raspberry JM Bushakra, NV Bassil, JE Weiland, CE Finn, KJ Vining, S Filichkin, ... XI International Rubus and Ribes Symposium 1133, 103-114, 2015 | 6 | 2015 |
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