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Johannes Griss
Johannes Griss
PostDoc, EMBL-European Biofinformatics Institue
Verified email at ebi.ac.uk
Title
Cited by
Cited by
Year
The PRIDE database and related tools and resources in 2019: improving support for quantification data
Y Perez-Riverol, A Csordas, J Bai, M Bernal-Llinares, S Hewapathirana, ...
Nucleic acids research 47 (D1), D442-D450, 2019
61612019
2016 update of the PRIDE database and its related tools
JA Vizcaíno, A Csordas, N Del-Toro, JA Dianes, J Griss, I Lavidas, ...
Nucleic acids research 44 (D1), D447-D456, 2016
37222016
2016 update of the PRIDE database and its related tools
JA Vizcaíno, A Csordas, N Del-Toro, JA Dianes, J Griss, I Lavidas, ...
Nucleic acids research 44 (D1), D447-D456, 2016
37222016
2016 update of the PRIDE database and its related tools
JA Vizcaíno, A Csordas, N Del-Toro, JA Dianes, J Griss, I Lavidas, ...
Nucleic acids research 44 (D1), D447-D456, 2016
37222016
The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013
JA Vizcaíno, RG Côté, A Csordas, JA Dianes, A Fabregat, JM Foster, ...
Nucleic acids research 41 (D1), D1063-D1069, 2012
19872012
The reactome pathway knowledgebase 2022
M Gillespie, B Jassal, R Stephan, M Milacic, K Rothfels, A Senff-Ribeiro, ...
Nucleic acids research 50 (D1), D687-D692, 2022
10632022
B cells sustain inflammation and predict response to immune checkpoint blockade in human melanoma
J Griss, W Bauer, C Wagner, M Simon, M Chen, ...
Nature communications 10 (1), 4186, 2019
2672019
BioContainers: an open-source and community-driven framework for software standardization
F da Veiga Leprevost, BA Grüning, S Alves Aflitos, HL Röst, J Uszkoreit, ...
Bioinformatics 33 (16), 2580-2582, 2017
2382017
The mzIdentML data standard for mass spectrometry-based proteomics results
AR Jones, M Eisenacher, G Mayer, O Kohlbacher, J Siepen, SJ Hubbard, ...
Molecular & Cellular Proteomics 11 (7), M111. 014381-1-M111. 014381-10, 2012
2192012
Recognizing millions of consistently unidentified spectra across hundreds of shotgun proteomics datasets
J Griss, Y Perez-Riverol, S Lewis, DL Tabb, JA Dianes, N Del-Toro, ...
Nature methods 13 (8), 651-656, 2016
1822016
ReactomeGSA-efficient multi-omics comparative pathway analysis
J Griss, G Viteri, K Sidiropoulos, V Nguyen, A Fabregat, H Hermjakob
Molecular & Cellular Proteomics 19 (12), 2115-2125, 2020
1782020
PRIDE inspector toolsuite: moving toward a universal visualization tool for proteomics data standard formats and quality assessment of ProteomeXchange datasets
Y Perez-Riverol, QW Xu, R Wang, J Uszkoreit, J Griss, A Sanchez, ...
Molecular & Cellular Proteomics 15 (1), 305-317, 2016
1492016
The mzTab data exchange format: communicating mass-spectrometry-based proteomics and metabolomics experimental results to a wider audience
J Griss, AR Jones, T Sachsenberg, M Walzer, L Gatto, J Hartler, ...
Molecular & Cellular Proteomics 13 (10), 2765-2775, 2014
1442014
Tumor-associated B-cells induce tumor heterogeneity and therapy resistance
R Somasundaram, G Zhang, M Fukunaga-Kalabis, M Perego, C Krepler, ...
Nature communications 8 (1), 607, 2017
1272017
PRIDE Inspector: a tool to visualize and validate MS proteomics data
R Wang, A Fabregat, D Ríos, D Ovelleiro, JM Foster, RG Côté, J Griss, ...
Nature biotechnology 30 (2), 135-137, 2012
1252012
Tumor-infiltrating mast cells are associated with resistance to anti-PD-1 therapy
R Somasundaram, T Connelly, R Choi, H Choi, A Samarkina, L Li, ...
Nature communications 12 (1), 346, 2021
1192021
The PRoteomics IDEntification (PRIDE) Converter 2 framework: an improved suite of tools to facilitate data submission to the PRIDE database and the ProteomeXchange consortium
RG Côté, J Griss, JA Dianes, R Wang, JC Wright, HWP van den Toorn, ...
Molecular & Cellular Proteomics 11 (12), 1682-1689, 2012
1102012
Tumor-associated B cells in cutaneous primary melanoma and improved clinical outcome
K Garg, M Maurer, J Griss, MC Brüggen, IH Wolf, C Wagner, N Willi, ...
Human pathology 54, 157-164, 2016
972016
Spectral library searching in proteomics
J Griss
Proteomics 16 (5), 729-740, 2016
902016
Persistence of mature dendritic cells, TH2A, and Tc2 cells characterize clinically resolved atopic dermatitis under IL-4Rα blockade
C Bangert, K Rindler, T Krausgruber, N Alkon, FM Thaler, H Kurz, T Ayub, ...
Science immunology 6 (55), eabe2749, 2021
812021
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