Nina Luhmann
Nina Luhmann
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GrapeTree: Visualization of core genomic relationships among 100,000 bacterial pathogens
Z Zhou, NF Alikhan, MJ Sergeant, N Luhmann, C Vaz, AP Francisco, ...
Genome research 28 (9), 1395-1404, 2018
Accurate Reconstruction of Microbial Strains from Metagenomic Sequencing Using Representative Reference Genomes
Z Zhou, N Luhmann, NF Alikhan, C Quince, M Achtman
International Conference on Research in Computational Molecular Biology, 225-240, 2018
Comparative Methods for Reconstructing Ancient Genome Organization
Y Anselmetti, N Luhmann, S Bérard, E Tannier, C Chauve
Comparative Genomics, 343-362, 2018
Scaffolding of ancient contigs and ancestral reconstruction in a phylogenetic framework
N Luhmann, C Chauve, J Stoye, R Wittler
IEEE/ACM transactions on computational biology and bioinformatics 15 (6 …, 2018
BlastFrost: fast querying of 100,000 s of bacterial genomes in Bifrost graphs
N Luhmann, G Holley, M Achtman
Genome Biology 22 (1), 1-15, 2021
The SCJ small parsimony problem for weighted gene adjacencies
N Luhmann, M Lafond, A Thévenin, A Ouangraoua, R Wittler, C Chauve
IEEE/ACM transactions on computational biology and bioinformatics, 2017
Comparative scaffolding and gap filling of ancient bacterial genomes applied to two ancient Yersinia pestis genomes
N Luhmann, D Doerr, C Chauve
Microbial Genomics 3 (9), 2017
Role of the mobilome in the global dissemination of the carbapenem resistance gene blaNDM
M Acman, R Wang, L van Dorp, LP Shaw, Q Wang, N Luhmann, Y Yuyao, ...
bioRxiv, 2021
Principles of Systems Biology, No. 31
H Cho, B Berger, J Peng, C Galitzine, O Vitek, PMJ Beltran, IM Cristea, ...
Cell systems 7 (2), 133-135, 2018
Phylogenetic assembly of paleogenomes integrating ancient DNA data
N Luhmann
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