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Daniel Ramsköld
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Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells
D Ramsköld, S Luo, YC Wang, R Li, Q Deng, OR Faridani, GA Daniels, ...
Nature biotechnology 30 (8), 777-782, 2012
16852012
Single-cell RNA-seq reveals dynamic, random monoallelic gene expression in mammalian cells
Q Deng, D Ramsköld, B Reinius, R Sandberg
Science 343 (6167), 193-196, 2014
12922014
An abundance of ubiquitously expressed genes revealed by tissue transcriptome sequence data
D Ramsköld, ET Wang, CB Burge, R Sandberg
PLoS computational biology 5 (12), e1000598, 2009
9632009
Single-cell RNA counting at allele and isoform resolution using Smart-seq3
M Hagemann-Jensen, C Ziegenhain, P Chen, D Ramsköld, GJ Hendriks, ...
Nature biotechnology 38 (6), 708-714, 2020
4742020
Sequentially acting Sox transcription factors in neural lineage development
M Bergsland, D Ramsköld, C Zaouter, S Klum, R Sandberg, J Muhr
Genes & development 25 (23), 2453-2464, 2011
3622011
Transcription factor Nurr1 maintains fiber integrity and nuclear-encoded mitochondrial gene expression in dopamine neurons
B Kadkhodaei, A Alvarsson, N Schintu, D Ramsköld, N Volakakis, ...
Proceedings of the National Academy of Sciences 110 (6), 2360-2365, 2013
1812013
BMP signaling and its pSMAD1/5 target genes differentially regulate hair follicle stem cell lineages
M Genander, PJ Cook, D Ramsköld, BE Keyes, AF Mertz, R Sandberg, ...
Cell stem cell 15 (5), 619-633, 2014
1652014
Non-canonical Notch signaling activates IL-6/JAK/STAT signaling in breast tumor cells and is controlled by p53 and IKKα/IKKβ
S Jin, AP Mutvei, IV Chivukula, ER Andersson, D Ramsköld, R Sandberg, ...
Oncogene 32 (41), 4892-4902, 2013
1522013
Analysis of allelic expression patterns in clonal somatic cells by single-cell RNA–seq
B Reinius, JE Mold, D Ramsköld, Q Deng, P Johnsson, J Michaëlsson, ...
Nature genetics 48 (11), 1430-1435, 2016
1442016
Genome-wide mapping of promoter-anchored interactions with close to single-enhancer resolution
P Sahlén, I Abdullayev, D Ramsköld, L Matskova, N Rilakovic, B Lötstedt, ...
Genome biology 16, 1-13, 2015
1422015
Recognition of amino acid motifs, rather than specific proteins, by human plasma cell–derived monoclonal antibodies to posttranslationally modified proteins in rheumatoid arthritis
J Steen, B Forsström, P Sahlström, V Odowd, L Israelsson, ...
Arthritis & Rheumatology 71 (2), 196-209, 2019
126*2019
Mouse model of Alagille syndrome and mechanisms of Jagged1 missense mutations
ER Andersson, IV Chivukula, S Hankeova, M Sjöqvist, YL Tsoi, ...
Gastroenterology 154 (4), 1080-1095, 2018
1202018
B cell alterations during BAFF inhibition with belimumab in SLE
D Ramsköld, I Parodis, T Lakshmikanth, N Sippl, M Khademi, Y Chen, ...
EBioMedicine, 2018
1042018
Smoking and pre-existing organ damage reduce the efficacy of belimumab in systemic lupus erythematosus
I Parodis, C Sjöwall, A Jönsen, D Ramsköld, A Zickert, M Frodlund, ...
Autoimmunity Reviews, 2017
972017
The RNA WikiProject: community annotation of RNA families
J Daub, PP Gardner, J Tate, D Ramsköld, M Manske, WG Scott, ...
Rna 14 (12), 2462-2464, 2008
752008
B cells expressing the IgA receptor FcRL4 participate in the autoimmune response in patients with rheumatoid arthritis
K Amara, E Clay, L Yeo, D Ramsköld, J Spengler, N Sippl, JA Cameron, ...
Journal of autoimmunity 81, 34-43, 2017
692017
Integration of known DNA, RNA and protein biomarkers provides prediction of anti-TNF response in rheumatoid arthritis: results from the COMBINE study
L Folkersen, B Brynedal, LM Diaz-Gallo, D Ramsköld, K Shchetynsky, ...
Molecular medicine 22, 322-328, 2016
522016
RNA helicase A is a downstream mediator of KIF1Bβ tumor-suppressor function in neuroblastoma
ZX Chen, K Wallis, SM Fell, VR Sobrado, MC Hemmer, D Ramsköld, ...
Cancer discovery 4 (4), 434-451, 2014
522014
Loss of CSL unlocks a hypoxic response and enhanced tumor growth potential in breast cancer cells
EB Braune, YL Tsoi, YP Phoon, S Landor, HS Cascales, D Ramsköld, ...
Stem cell reports 6 (5), 643-651, 2016
432016
How to analyze gene expression using RNA-sequencing data
D Ramsköld, E Kavak, R Sandberg
Next Generation Microarray Bioinformatics: Methods and Protocols, 259-274, 2012
432012
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