| Methyl-CpG-binding domain proteins: readers of the epigenome Q Du, PL Luu, C Stirzaker, SJ Clark Epigenomics 7 (6), 1051-1073, 2015 | 473 | 2015 |
| Epigenetic reprogramming at estrogen-receptor binding sites alters 3D chromatin landscape in endocrine-resistant breast cancer J Achinger-Kawecka, F Valdes-Mora, PL Luu, KA Giles, CE Caldon, W Qu, ... Nature communications 11 (1), 320, 2020 | 119 | 2020 |
| Replication timing and epigenome remodelling are associated with the nature of chromosomal rearrangements in cancer Q Du, SA Bert, NJ Armstrong, CE Caldon, JZ Song, SS Nair, CM Gould, ... Nature communications 10 (1), 416, 2019 | 112 | 2019 |
| Constitutively bound CTCF sites maintain 3D chromatin architecture and long-range epigenetically regulated domains A Khoury, J Achinger-Kawecka, SA Bert, GC Smith, HJ French, PL Luu, ... Nature communications 11 (1), 54, 2020 | 85 | 2020 |
| Comprehensive evaluation of genome-wide 5-hydroxymethylcytosine profiling approaches in human DNA K Skvortsova, E Zotenko, PL Luu, CM Gould, SS Nair, SJ Clark, ... Epigenetics & chromatin 10, 1-20, 2017 | 85 | 2017 |
| DNA hypermethylation encroachment at CpG island borders in cancer is predisposed by H3K4 monomethylation patterns K Skvortsova, E Masle-Farquhar, PL Luu, JZ Song, W Qu, E Zotenko, ... Cancer cell 35 (2), 297-314. e8, 2019 | 76 | 2019 |
| DNA methylation is required to maintain both DNA replication timing precision and 3D genome organization integrity Q Du, GC Smith, PL Luu, JM Ferguson, NJ Armstrong, CE Caldon, ... Cell Reports 36 (12), 2021 | 44 | 2021 |
| Guidelines for whole genome bisulphite sequencing of intact and FFPET DNA on the Illumina HiSeq X Ten SS Nair, PL Luu, W Qu, M Maddugoda, L Huschtscha, R Reddel, ... Epigenetics & chromatin 11, 1-20, 2018 | 42 | 2018 |
| Disclosing the crosstalk among DNA methylation, transcription factors, and histone marks in human pluripotent cells through discovery of DNA methylation motifs PL Luu, HR Schöler, MJ Araúzo-Bravo Genome Research 23 (12), 2013 | 33 | 2013 |
| Comprehensive evaluation of targeted multiplex bisulphite PCR sequencing for validation of DNA methylation biomarker panels D Lam, PL Luu, JZ Song, W Qu, GP Risbridger, MG Lawrence, J Lu, ... Clinical Epigenetics 12, 1-16, 2020 | 22 | 2020 |
| Benchmark study comparing liftover tools for genome conversion of epigenome sequencing data PL Luu, PT Ong, TP Dinh, SJ Clark NAR genomics and bioinformatics 2 (3), lqaa054, 2020 | 20 | 2020 |
| BRG1 knockdown inhibits proliferation through multiple cellular pathways in prostate cancer KA Giles, CM Gould, J Achinger-Kawecka, SG Page, GR Kafer, S Rogers, ... Clinical Epigenetics 13, 1-18, 2021 | 15 | 2021 |
| P3BSseq: parallel processing pipeline software for automatic analysis of bisulfite sequencing data PL Luu, D Gerovska, M Arrospide-Elgarresta, S Retegi-Carrión, ... Bioinformatics 33 (3), 428-431, 2017 | 15 | 2017 |
| Identification of DNA methylation biomarkers with potential to predict response to neoadjuvant chemotherapy in triple-negative breast cancer B Meyer, S Clifton, W Locke, PL Luu, Q Du, D Lam, NJ Armstrong, ... Clinical Epigenetics 13, 1-7, 2021 | 14 | 2021 |
| Rules governing the mechanism of epigenetic reprogramming memory PL Luu, D Gerovska, HR Schöler, MJ Araúzo-Bravo Epigenomics 10 (2), 149-174, 2018 | 13 | 2018 |
| Widespread aberrant alternative splicing despite molecular remission in chronic myeloid leukaemia patients U Schmitz, JS Shah, BP Dhungel, G Monteuuis, PL Luu, V Petrova, ... Cancers 12 (12), 3738, 2020 | 9 | 2020 |
| Comprehensive methylome sequencing reveals prognostic epigenetic biomarkers for prostate cancer mortality R Pidsley, D Lam, W Qu, TJ Peters, PL Luu, D Korbie, C Stirzaker, ... Clinical and Translational Medicine 12 (10), e1030, 2022 | 8 | 2022 |
| A novel signature predicts recurrence risk and therapeutic response in breast cancer patients QH Tran, VT Than, PL Luu, D Clarke, HN Lam, TGT Nguyen, DT Nguyen, ... International Journal of Cancer 148 (11), 2848-2856, 2021 | 4* | 2021 |
| MethPanel: a parallel pipeline and interactive analysis tool for multiplex bisulphite PCR sequencing to assess DNA methylation biomarker panels for disease detection SJC Phuc-Loi Luu, Phuc-Thinh Ong, Tran Thai Huu Loc, Dilys Lam, Ruth Pidsley ... Bioinformatics, 2020 | 2* | 2020 |
| Characterisation and reproducibility of the HumanMethylationEPIC v2. 0 BeadChip for DNA methylation profiling TJ Peters, B Meyer, L Ryan, J Achinger-Kawecka, J Song, EM Campbell, ... BMC genomics 25 (1), 251, 2024 | | 2024 |
