Ribosome traffic on mRNAs maps to gene ontology: genome-wide quantification of translation initiation rates and polysome size regulation L Ciandrini, I Stansfield, MC Romano PLoS Comput Biol 9 (1), e1002866, 2013 | 110 | 2013 |
Role of the particle’s stepping cycle in an asymmetric exclusion process: a model of mRNA translation L Ciandrini, I Stansfield, MC Romano Physical Review E 81 (5), 051904, 2010 | 80 | 2010 |
Mixed population of competing totally asymmetric simple exclusion processes with a shared reservoir of particles P Greulich, L Ciandrini, RJ Allen, MC Romano Physical Review E 85 (1), 011142, 2012 | 64 | 2012 |
A yeast tRNA mutant that causes pseudohyphal growth exhibits reduced rates of CAG codon translation AJ Kemp, R Betney, L Ciandrini, ACM Schwenger, MC Romano, ... Molecular microbiology 87 (2), 284-300, 2013 | 33 | 2013 |
Gene length as a regulator for ribosome recruitment and protein synthesis: theoretical insights LD Fernandes, APS de Moura, L Ciandrini Scientific Reports 7, 17409, 2017 | 29 | 2017 |
Transport on a lattice with dynamical defects F Turci, A Parmeggiani, E Pitard, MC Romano, L Ciandrini Physical Review E 87 (1), 012705, 2013 | 24 | 2013 |
Deciphering mRNA Sequence Determinants of Protein Production Rate J Szavits-Nossan, L Ciandrini, MC Romano Physical Review Letters 120, 128101, 2018 | 21 | 2018 |
Stepping and crowding of molecular motors: statistical kinetics from an exclusion process perspective L Ciandrini, MC Romano, A Parmeggiani Biophysical Journal 107 (5), 1176–1184, 2014 | 19 | 2014 |
Motor protein traffic regulation by supply–demand balance of resources L Ciandrini, I Neri, JC Walter, O Dauloudet, A Parmeggiani Physical biology 11 (5), 056006, 2014 | 16 | 2014 |
Identification of the mRNA targets of tRNA-specific regulation using genome-wide simulation of translation B Gorgoni, L Ciandrini, MR McFarland, MC Romano, I Stansfield Nucleic acids research 44 (19), 9231-9244, 2016 | 14 | 2016 |
Power series solution of the inhomogeneous exclusion process J Szavits-Nossan, MC Romano, L Ciandrini Physical Review E 97, 052139, 2018 | 12 | 2018 |
Unraveling Molecular Interactions in Liquid–Liquid Phase Separation of Disordered Proteins by Atomistic Simulations M Paloni, R Bailly, L Ciandrini, A Barducci The Journal of Physical Chemistry B 124 (41), 9009-9016, 2020 | 10 | 2020 |
Multiple phase transitions in a system of exclusion processes with limited reservoirs of particles and fuel carriers CA Brackley, L Ciandrini, MC Romano Journal of Statistical Mechanics: Theory and Experiment 2012 (03), P03002, 2012 | 9 | 2012 |
Driven transport on a flexible polymer with particle recycling: a model inspired by transcription and translation LD Fernandes, L Ciandrini Physical Review E 99 (5), 052409, 2019 | 6 | 2019 |
Feedback topology and XOR-dynamics in Boolean networks with varying input structure L Ciandrini, C Maffi, A Motta, B Bassetti, MC Lagomarsino Physical Review E 80 (2), 026122, 2009 | 4 | 2009 |
Inferring efficiency of translation initiation and elongation from ribosome profiling J Szavits-Nossan, L Ciandrini Nucleic Acids Research 48 (17), https://doi.org/10.1093/nar/gkaa678, 2020 | 3* | 2020 |
Rational programming of history-dependent logic in cellular populations A Zúñiga, S Guiziou, P Mayonove, ZB Meriem, M Camacho, V Moreau, ... Nature Communications 11 (1), 1-14, 2020 | 2 | 2020 |
An equilibrium model for ribosome competition PS Rogalla, TJ Rudge, L Ciandrini Physical Biology 17 (1), 015002, 2019 | | 2019 |
Exclusion process subject to conformational size changes Y Rousset, L Ciandrini, N Kern SciPost Phys. 6 (77), 2019 | | 2019 |
Molecular Motors with a Stepping Cycle: From Theory to Experiments L Ciandrini Traffic and Granular Flow'13, 619-627, 2015 | | 2015 |