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Jaya Yodh
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Asymmetric Unwrapping of Nucleosomes under Tension Directed by DNA Local Flexibility
TTM Ngo, Q Zhang, R Zhou, JG Yodh, T Ha
Cell 160 (6), 1135-1144, 2015
3172015
Glutaraldehyde modified mica: A new surface for atomic force microscopy of chromatin
SM Wang, H., Bash, R., Yodh, J. G., Hager, G. L., Lohr, D., and Lindsay
Biophysical Journal 83, 3619-3625, 2002
1692002
BLM helicase measures DNA unwound before switching strands and hRPA promotes unwinding reinitiation
JG Yodh, BC Stevens, R Kanagaraj, P Janscak, T Ha
The EMBO journal 28 (4), 405-416, 2009
922009
Using atomic force microscopy to study chromatin structure and nucleosome remodeling
S Lohr, D., Bash, R., Wang, H. Yodh, J., and Lindsay
Methods 41 (3), 333-341, 2007
812007
Insight into helicase mechanism and function revealed through single-molecule approaches
JG Yodh, M Schlierf, T Ha
Quarterly reviews of biophysics 43 (02), 185-217, 2010
802010
RecQ-core of BLM unfolds telomeric G-quadruplex in the absence of ATP
JB Budhathoki, S Ray, V Urban, P Janscak, JG Yodh, H Balci
Nucleic acids research 42 (18), 11528-11545, 2014
742014
Mapping nucleosome locations on the 208-12 by AFM provides clear evidence for cooperativity in array occupation
JG Yodh, N Woodbury, LS Shlyakhtenko, YL Lyubchenko, D Lohr
Biochemistry 41 (11), 3565-3574, 2002
662002
Evidence for nonrandom behavior in 208-12 subsaturated nucleosomal array populations analyzed by AFM
JG Yodh, YL Lyubchenko, LS Shlyakhtenko, N Woodbury, D Lohr
Biochemistry 38 (48), 15756-15763, 1999
581999
Sequence-dependent nucleosome structure and stability variations detected by Förster resonance energy transfer
L Kelbauskas, N Chan, R Bash, J Yodh, N Woodbury, D Lohr
Biochemistry 46 (8), 2239-2248, 2007
572007
AFM imaging of proteins movements: Histone H2A-H2B release during nucleosome remodeling
D Bash, R., Wang, H., Anderson, C., Yodh, J. Hager, G., Lindsay, S.M., and D ...
FEBS Letters 580, 4757-4761, 2006
552006
ATP-dependent G-quadruplex unfolding by Bloom helicase exhibits low processivity
JB Budhathoki, EJ Stafford, JG Yodh, H Balci
Nucleic acids research, gkv531, 2015
462015
Using Atomic Force Microscopy to Study Nucleosome Remodeling on Individual Nucleosomal Arrays in Situ
D Wang, H., Bash, R., Yodh, J. G., Hager, G., Lindsay, S. M., and Lohr
Biophysical Journal 87, 1964-1971, 2004
362004
Population analysis of subsaturated 172-12 nucleosomal arrays by atomic force microscopy detects nonrandom behavior that is favored by histone acetylation and short repeat length
RC Bash, J Yodh, Y Lyubchenko, N Woodbury, D Lohr
Journal of Biological Chemistry 276 (51), 48362-48370, 2001
352001
A Comparative Study of G-Quadruplex Unfolding and DNA Reeling Activities of Human RECQ5 Helicase
JB Budhathoki, P Maleki, WA Roy, P Janscak, JG Yodh, H Balci
Biophysical Journal 110 (12), 2585-2596, 2016
332016
A Statistical Thermodynamic Model Applied to Experimental AFM Population and Location Data Is Able to Quantify DNA-Histone Binding Strength and Internucleosomal Interaction …
D Solis, F. J., Bash, R., Yodh, J., Lindsay, S. M., and Lohr
Biophysical Journal 87, 3372-3387, 2004
292004
Interaction of human hemoglobin and its variants with agar
WP Winter, J Yodh
Science 221 (4606), 175-178, 1983
261983
A fluorescence resonance energy transfer-based probe to monitor nucleosome structure
NW Lovullo, D., Daniel, D., Yodh, J., Lohr, D., and Woodbury
Analytical Biochemistry 341, 165-172, 2005
232005
ATP-Dependent Chromatin Remodeling
J Yodh
DNA Helicases and DNA Motor Proteins, 263-295, 2013
202013
Nucleosomal arrays can be salt-reconstituted on a single-copy MMTV promoter DNA template: Their properties differ in several ways from those of comparable 5S concatameric arrays
D Bash, R., Wang, H., Yodh, J., Hager, G., Lindsay, S. M., and Lohr
Biochemistry 42 (16), 4681 - 4690, 2003
202003
Properties of nucleosomes in acetylated mouse mammary tumor virus versus 5S Arrays
D Solis, F. J., Bash, R.,Wang, H., Yodh, J., Lindsay, S. A., and Lohr
Biochemistry 46 (19), 5623-5634, 2007
102007
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