Cedric Chauve

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Eric TannierINRIA, Université de Lyon 1Verified email at inria.fr
Anne BergeronComputer Science, Université du Québec à MontréalVerified email at uqam.ca
Yann PontyCNRS and Ecole PolytechniqueVerified email at lix.polytechnique.fr
Murray PattersonAssistant Professor, Georgia State UniversityVerified email at cs.gsu.edu
Annie ChateauMaître de conférences, Université de MontpellierVerified email at lirmm.fr
Ashok RajaramanAccenture Inc.Verified email at accenture.com
Sylvie HamelProfesseure titulaire, Informatique et recherche opérationnelle, Université de MontréalVerified email at umontreal.ca
Guillaume FertinUniversity of Nantes, LS2N, FranceVerified email at univ-nantes.fr
Christophe PaulCNRS LIRMMVerified email at lirmm.fr
Jan ManuchComputer Science, University of British ColumbiaVerified email at cs.ubc.ca
Celine ScornavaccaInstitut des Sciences de l'Evolution, MontpellierVerified email at umontpellier.fr
Guillaume BlinFull Professor of Computer Science, Université de Bordeaux, FranceVerified email at labri.fr
Julien Allalimaître de conférences informatique, LaBRI, IPBVerified email at labri.fr
Pedro FeijãoSimon Fraser UniversityVerified email at sfu.ca
Faraz HachAssistant Professor at University of British ColumbiaVerified email at ubc.ca
Leonid ChindelevitchImperial CollegeVerified email at ic.ac.uk
Andrew McPhersonPost Doctoral Fellow, University of British ColumbiaVerified email at bccrc.ca
Nina LuhmannUniversity of MainzVerified email at uni-mainz.de
Cenk SahinalpSenior Investigator, Cancer Data Science Lab, National Cancer Institute, NIHVerified email at nih.gov
William HsiaoBCCDC Public Health LaboratoryVerified email at sfu.ca

Cedric Chauve

Professor of Mathematics, Simon Fraser University

Verified email at sfu.ca - Homepage

Computational Biology Algorithms Design and Analysis Discrete Mathematics


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Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes DE Neafsey, RM Waterhouse, MR Abai, SS Aganezov, MA Alekseyev, ... Science 347 (6217), 2015	468	2015
FragAnchor: a large-scale predictor of glycosylphosphatidylinositol anchors in eukaryote protein sequences by qualitative scoring G Poisson, C Chauve, X Chen, A Bergeron Genomics, proteomics & bioinformatics 5 (2), 121-130, 2007	138	2007
Identification, expression, and evolutionary analyses of plant lipocalins JB Frenette Charron, F Ouellet, M Pelletier, J Danyluk, C Chauve, ... Plant physiology 139 (4), 2017-2028, 2005	122	2005
A methodological framework for the reconstruction of contiguous regions of ancestral genomes and its application to mammalian genomes C Chauve, E Tannier PLoS computational biology 4 (11), e1000234, 2008	103	2008
ANGES: reconstructing ANcestral GEnomeS maps BR Jones, A Rajaraman, E Tannier, C Chauve Bioinformatics 28 (18), 2388-2390, 2012	71	2012
Computing Common Intervals of K Permutations, with Applications to Modular Decomposition of Graphs A Bergeron, C Chauve, F De Montgolfier, M Raffinot European Symposium on Algorithms, 779-790, 2005	70	2005
Reconstructing ancestral gene orders using conserved intervals A Bergeron, M Blanchette, A Chateau, C Chauve International Workshop on Algorithms in Bioinformatics, 14-25, 2004	70	2004
ecceTERA: comprehensive gene tree-species tree reconciliation using parsimony E Jacox, C Chauve, GJ Szöllősi, Y Ponty, C Scornavacca Bioinformatics 32 (13), 2056-2058, 2016	67	2016
Perfect sorting by reversals is not always difficult S Bérard, A Bergeron, C Chauve, C Paul IEEE/ACM transactions on computational biology and bioinformatics 4 (1), 4-16, 2007	62	2007
Gene family evolution by duplication, speciation, and loss C Chauve, JP Doyon, N El-Mabrouk Journal of Computational Biology 15 (8), 1043-1062, 2008	61	2008
The breakpoint distance for signed sequences G Blin, C Chauve, G Fertin Proc. 1st Algorithms and Computational Methods for Biochemical and …, 2004	59	2004
On the properties of sequences of reversals that sort a signed permutation A Bergeron, C Chauve, T Hartman, K St-Onge Proceedings of JOBIM 2, 99-108, 2002	59	2002
New perspectives on gene family evolution: losses in reconciliation and a link with supertrees C Chauve, N El-Mabrouk Annual International Conference on Research in Computational Molecular …, 2009	54	2009
Comparing genomes with duplications: a computational complexity point of view G Blin, C Chauve, G Fertin, R Rizzi, S Vialette IEEE/ACM Transactions on Computational Biology and Bioinformatics 4 (4), 523-534, 2007	51	2007
Space of gene/species trees reconciliations and parsimonious models JP Doyon, C Chauve, S Hamel Journal of Computational Biology 16 (10), 1399-1418, 2009	49	2009
Conservation of combinatorial structures in evolution scenarios S Bérard, A Bergeron, C Chauve RECOMB Workshop on Comparative Genomics, 1-14, 2004	47	2004
Colormap: Correcting long reads by mapping short reads E Haghshenas, F Hach, SC Sahinalp, C Chauve Bioinformatics 32 (17), i545-i551, 2016	45	2016
Computing Common Intervals of K Permutations, with Applications to Modular Decomposition of Graphs A Bergeron, C Chauve, F De Montgolfier, M Raffinot SIAM Journal on Discrete Mathematics 22 (3), 1022-1039, 2008	45	2008
Formal models of gene clusters A Bergeron, C Chauve, Y Gingras Bioinformatics algorithms: techniques and applications 8, 177-202, 2008	42	2008
Reconstructing the architecture of the ancestral amniote genome A Ouangraoua, E Tannier, C Chauve Bioinformatics 27 (19), 2664-2671, 2011	41	2011

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