Cedric Chauve

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Eric TannierINRIA, Université de Lyon 1Verified email at inria.fr
Anne BergeronComputer Science, Université du Québec à MontréalVerified email at uqam.ca
Yann PontySenior researcher at CNRS & Ecole PolytechniqueVerified email at lix.polytechnique.fr
Murray PattersonAssistant Professor, Georgia State UniversityVerified email at cs.gsu.edu
Annie ChateauMaître de conférences, Université de MontpellierVerified email at lirmm.fr
Guillaume FertinUniversity of Nantes, LS2N, FranceVerified email at univ-nantes.fr
Faraz HachAssistant Professor at University of British ColumbiaVerified email at ubc.ca
Ashok RajaramanAccenture Inc.Verified email at accenture.com
Sylvie HamelProfesseure titulaire, Informatique et recherche opérationnelle, Université de MontréalVerified email at umontreal.ca
Christophe PaulCNRS LIRMMVerified email at lirmm.fr
Jan ManuchComputer Science, University of British ColumbiaVerified email at cs.ubc.ca
Guillaume BlinFull Professor of Computer Science, Université de Bordeaux, FranceVerified email at labri.fr
Celine ScornavaccaInstitut des Sciences de l'Evolution, MontpellierVerified email at umontpellier.fr
Pedro FeijãoSimon Fraser UniversityVerified email at sfu.ca
Julien Allalimaître de conférences informatique, LaBRI, IPBVerified email at labri.fr
Andrew McPhersonPost Doctoral Fellow, University of British ColumbiaVerified email at bccrc.ca
Nina LuhmannUniversity of MainzVerified email at uni-mainz.de
Cenk SahinalpSenior Investigator, Cancer Data Science Lab, National Cancer Institute, NIHVerified email at nih.gov
Leonid ChindelevitchImperial CollegeVerified email at ic.ac.uk
Ehsan HaghshenasSimon Fraser UniversityVerified email at sfu.ca

Cedric Chauve

Professor of Mathematics, Simon Fraser University

Verified email at sfu.ca - Homepage

Computational Biology Algorithms Design and Analysis Discrete Mathematics


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Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes DE Neafsey, RM Waterhouse, MR Abai, SS Aganezov, MA Alekseyev, ... Science 347 (6217), 1258522, 2015	531	2015
FragAnchor: a large-scale predictor of glycosylphosphatidylinositol anchors in eukaryote protein sequences by qualitative scoring G Poisson, C Chauve, X Chen, A Bergeron Genomics, proteomics & bioinformatics 5 (2), 121-130, 2007	143	2007
Identification, expression, and evolutionary analyses of plant lipocalins JB Frenette Charron, F Ouellet, M Pelletier, J Danyluk, C Chauve, ... Plant Physiology 139 (4), 2017-2028, 2005	129	2005
A methodological framework for the reconstruction of contiguous regions of ancestral genomes and its application to mammalian genomes C Chauve, E Tannier PLoS computational biology 4 (11), e1000234, 2008	109	2008
ecceTERA: comprehensive gene tree-species tree reconciliation using parsimony E Jacox, C Chauve, GJ Szöllősi, Y Ponty, C Scornavacca Bioinformatics 32 (13), 2056-2058, 2016	88	2016
ANGES: reconstructing ANcestral GEnomeS maps BR Jones, A Rajaraman, E Tannier, C Chauve Bioinformatics 28 (18), 2388-2390, 2012	76	2012
Reconstructing ancestral gene orders using conserved intervals A Bergeron, M Blanchette, A Chateau, C Chauve Algorithms in Bioinformatics: 4th International Workshop, WABI 2004, Bergen …, 2004	72	2004
Computing Common Intervals of K Permutations, with Applications to Modular Decomposition of Graphs A Bergeron, C Chauve, F De Montgolfier, M Raffinot Algorithms–ESA 2005: 13th Annual European Symposium, Palma de Mallorca …, 2005	71	2005
Gene family evolution by duplication, speciation, and loss C Chauve, JP Doyon, N El-Mabrouk Journal of Computational Biology 15 (8), 1043-1062, 2008	66	2008
Perfect sorting by reversals is not always difficult S Bérard, A Bergeron, C Chauve, C Paul IEEE/ACM transactions on computational biology and bioinformatics 4 (1), 4-16, 2007	63	2007
The breakpoint distance for signed sequences G Blin, C Chauve, G Fertin Proc. 1st Algorithms and Computational Methods for Biochemical and …, 2004	63	2004
On the properties of sequences of reversals that sort a signed permutation A Bergeron, C Chauve, T Hartman, K St-Onge Proceedings of JOBIM 2, 99-108, 2002	59	2002
New perspectives on gene family evolution: losses in reconciliation and a link with supertrees C Chauve, N El-Mabrouk Research in Computational Molecular Biology: 13th Annual International …, 2009	57	2009
CoLoRMap: correcting long reads by mapping short reads E Haghshenas, F Hach, SC Sahinalp, C Chauve Bioinformatics 32 (17), i545-i551, 2016	55	2016
Space of gene/species trees reconciliations and parsimonious models JP Doyon, C Chauve, S Hamel Journal of Computational Biology 16 (10), 1399-1418, 2009	50	2009
Comparing genomes with duplications: a computational complexity point of view G Blin, C Chauve, G Fertin, R Rizzi, S Vialette IEEE/ACM Transactions on Computational Biology and Bioinformatics 4 (4), 523-534, 2007	50	2007
Conservation of combinatorial structures in evolution scenarios S Bérard, A Bergeron, C Chauve Comparative Genomics: RECOMB 2004 International Workshop, RCG 2004 …, 2005	50	2005
Computing Common Intervals of K Permutations, with Applications to Modular Decomposition of Graphs A Bergeron, C Chauve, F De Montgolfier, M Raffinot SIAM Journal on Discrete Mathematics 22 (3), 1022-1039, 2008	48	2008
MentaLiST–A fast MLST caller for large MLST schemes P Feijao, HT Yao, D Fornika, J Gardy, W Hsiao, C Chauve, ... Microbial genomics 4 (2), 2018	47	2018
Formal models of gene clusters A Bergeron, C Chauve, Y Gingras Bioinformatics algorithms: techniques and applications 8, 177-202, 2008	44	2008

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