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Wenzhuo Tang
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Deep learning in single-cell analysis
D Molho, J Ding, W Tang, Z Li, H Wen, Y Wang, J Venegas, W Jin, R Liu, ...
ACM Transactions on Intelligent Systems and Technology 15 (3), 1-62, 2024
112024
Dance: A deep learning library and benchmark for single-cell analysis
J Ding, H Wen, W Tang, R Liu, Z Li, J Venegas, R Su, D Molho, W Jin, ...
bioRxiv, 2022.10. 19.512741, 2022
72022
Single-Cell Multimodal Prediction via Transformers
W Tang, H Wen, R Liu, J Ding, W Jin, Y Xie, H Liu, J Tang
Proceedings of the 32nd ACM International Conference on Information and …, 2023
42023
Single cells are spatial tokens: Transformers for spatial transcriptomic data imputation
H Wen, W Tang, W Jin, J Ding, R Liu, F Shi, Y Xie, J Tang
arXiv preprint arXiv:2302.03038, 2023
32023
Graph Foundation Models
H Mao, Z Chen, W Tang, J Zhao, Y Ma, T Zhao, N Shah, M Galkin, J Tang
arXiv preprint arXiv:2402.02216, 2024
22024
A General Single-Cell Analysis Framework via Conditional Diffusion Generative Models
W Tang, R Liu, H Wen, X Dai, J Ding, H Li, W Fan, Y Xie, J Tang
bioRxiv, 2023.10. 13.562243, 2023
22023
DANCE: A deep learning library and benchmark platform for single-cell analysis
J Ding, R Liu, H Wen, W Tang, Z Li, J Venegas, R Su, D Molho, W Jin, ...
Genome Biology 25 (1), 72, 2024
12024
SpatialCTD: a large-scale TME spatial transcriptomic dataset to evaluate cell type deconvolution for immuno-oncology
J Ding, J Venegas, Q Lu, Y Wang, L Wu, W Jin, H Wen, R Liu, W Tang, ...
bioRxiv, 2023.04. 11.536333, 2023
12023
CellPLM: Pre-training of Cell Language Model Beyond Single Cells
H Wen, W Tang, X Dai, J Ding, W Jin, Y Xie, J Tang
bioRxiv, 2023.10. 03.560734, 2023
12023
Graph Machine Learning in the Era of Large Language Models (LLMs)
W Fan, S Wang, J Huang, Z Chen, Y Song, W Tang, H Mao, H Liu, X Liu, ...
arXiv preprint arXiv:2404.14928, 2024
2024
MEM-GAN: A Pseudo Membrane Generator for Single-cell Imaging in Fluorescent Microscopy
Y Wang, J Ding, L Wu, A Wardhani, P Danaher, Q Lu, H Wen, W Tang, ...
bioRxiv, 2023.11. 08.566343, 2023
2023
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