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Jan Voges
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Comparison of high-throughput sequencing data compression tools
I Numanagić, JK Bonfield, F Hach, J Voges, J Ostermann, C Alberti, ...
nature methods 13 (12), 1005-1008, 2016
1052016
A comparison of jem and av1 with hevc: Coding tools, coding efficiency and complexity
T Laude, YG Adhisantoso, J Voges, M Munderloh, J Ostermann
2018 Picture Coding Symposium (PCS), 36-40, 2018
372018
A comprehensive video codec comparison
T Laude, YG Adhisantoso, J Voges, M Munderloh, J Ostermann
APSIPA Transactions on Signal and Information Processing 8, 2019
262019
CALQ: compression of quality values of aligned sequencing data
J Voges, J Ostermann, M Hernaez
Bioinformatics 34 (10), 1650-1658, 2018
232018
An introduction to MPEG-G, the new ISO standard for genomic information representation
C Albert, T Paridaens, J Voges, D Naro, JJ Ahmad, M Ravasi, D Renzi, ...
bioRxiv, 426353, 2018
182018
An evaluation framework for lossy compression of genome sequencing quality values
C Alberti, N Daniels, M Hernaez, J Voges, RL Goldfeder, ...
2016 Data Compression Conference (DCC), 221-230, 2016
182016
Predictive coding of aligned next-generation sequencing data
J Voges, M Munderloh, J Ostermann
2016 Data Compression Conference (DCC), 241-250, 2016
122016
An introduction to mpeg-g: the first open iso/iec standard for the compression and exchange of genomic sequencing data
J Voges, M Hernaez, M Mattavelli, J Ostermann
Proceedings of the IEEE 109 (9), 1607-1622, 2021
82021
GABAC: an arithmetic coding solution for genomic data
J Voges, T Paridaens, F Müntefering, LS Mainzer, B Bliss, M Yang, ...
Bioinformatics 36 (7), 2275-2277, 2020
72020
AliCo: a new efficient representation for SAM files
I Ochoa, H Li, F Baumgarte, C Hergenrother, J Voges, M Hernaez
2019 Data Compression Conference (DCC), 93-102, 2019
42019
Lossy compression of quality scores in differential gene expression: A first assessment and impact analysis
AA Hernandez-Lopez, J Voges, C Alberti, M Mattavelli, J Ostermann
2018 Data Compression Conference, 167-176, 2018
42018
A two-level scheme for quality score compression
J Voges, A Fotouhi, J Ostermann, MO Külekci
Journal of Computational Biology 25 (10), 1141-1151, 2018
32018
Genie: an MPEG-G conformant software to compress genomic data
B Bliss, J Allen, S Baheti, MA Bockol, S Chandak, J Delgado, J Fostier, ...
32018
Differential gene expression with lossy compression of quality scores in RNA-seq data
AA Hernandez-Lopez, J Voges, C Alberti, M Mattavelli, J Ostermann
2017 Data Compression Conference (DCC), 444-444, 2017
32017
Method for encoding and decoding of quality values of a data structure
J Voges, J Ostermann
US Patent 10,938,415, 2021
12021
Compression of DNA sequencing data
J Voges
Hannover: Institutionelles Repositorium der Leibniz Universität Hannover, 2022
2022
Method for encoding and decoding of quality values of a data structure
J Voges, M Hernaez, J Ostermann
US Patent App. 16/341,307, 2021
2021
GABAC: an arithmetic coding solution for genomic data
T Paridaens, J Voges, M Hernaez, J Fostier, J Ostermann
ISMB2019, the 27th Conference on Intelligent Systems for Molecular Biology, 2019
2019
Proceedings of the 4th Summer School on Video Compression and Processing (SVCP) 2018
H Bakhshi Golestani, J Bauer, J Erfurt, K Fischer, A Gehlert, N Genser, ...
Hannover: Institutionelles Repositorium der Leibniz Universität Hannover, 2018
2018
Method for Compressing Genomic Data
M Munderloh, J Voges, J Ostermann
US Patent App. 15/736,166, 2018
2018
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