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Kelly V. Ruggles
Kelly V. Ruggles
NYU Langone Medical Center
Verified email at nyumc.org - Homepage
Title
Cited by
Cited by
Year
Proteogenomics connects somatic mutations to signalling in breast cancer
P Mertins, DR Mani, KV Ruggles, MA Gillette, KR Clauser, P Wang, ...
Nature 534 (7605), 55-62, 2016
15262016
Proteogenomic analysis of human colon cancer reveals new therapeutic opportunities
S Vasaikar, C Huang, X Wang, VA Petyuk, SR Savage, B Wen, Y Dou, ...
Cell 177 (4), 1035-1049. e19, 2019
5562019
Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma
MA Gillette, S Satpathy, S Cao, SM Dhanasekaran, SV Vasaikar, K Krug, ...
Cell 182 (1), 200-225. e35, 2020
4432020
Integrated proteogenomic characterization of clear cell renal cell carcinoma
DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ...
Cell 179 (4), 964-983. e31, 2019
4362019
Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels
P Mertins, F Yang, T Liu, DR Mani, VA Petyuk, MA Gillette, KR Clauser, ...
Molecular & cellular proteomics 13 (7), 1690-1704, 2014
3892014
Proteogenomic and metabolomic characterization of human glioblastoma
LB Wang, A Karpova, MA Gritsenko, JE Kyle, S Cao, Y Li, D Rykunov, ...
Cancer cell 39 (4), 509-528. e20, 2021
3762021
Proteogenomic characterization of endometrial carcinoma
Y Dou, EA Kawaler, DC Zhou, MA Gritsenko, C Huang, L Blumenberg, ...
Cell 180 (4), 729-748. e26, 2020
3182020
Proteogenomic landscape of breast cancer tumorigenesis and targeted therapy
K Krug, EJ Jaehnig, S Satpathy, L Blumenberg, A Karpova, M Anurag, ...
Cell 183 (5), 1436-1456. e31, 2020
2992020
Integrated proteogenomic characterization across major histological types of pediatric brain cancer
F Petralia, N Tignor, B Reva, M Koptyra, S Chowdhury, D Rykunov, A Krek, ...
Cell 183 (7), 1962-1985. e31, 2020
1962020
A proteogenomic portrait of lung squamous cell carcinoma
S Satpathy, K Krug, PMJ Beltran, SR Savage, F Petralia, C Kumar-Sinha, ...
Cell 184 (16), 4348-4371. e40, 2021
1832021
Profiling the essential nature of lipid metabolism in asexual blood and gametocyte stages of Plasmodium falciparum
S Gulati, EH Ekland, KV Ruggles, RB Chan, B Jayabalasingham, B Zhou, ...
Cell host & microbe 18 (3), 371-381, 2015
1672015
CPTAC Assay Portal: a repository of targeted proteomic assays
JR Whiteaker, GN Halusa, AN Hoofnagle, V Sharma, B MacLean, P Yan, ...
Nature methods 11 (7), 703-704, 2014
1652014
Sterol and diacylglycerol acyltransferase deficiency triggers fatty acid-mediated cell death
J Garbarino, M Padamsee, L Wilcox, PM Oelkers, D D'Ambrosio, ...
Journal of Biological Chemistry 284 (45), 30994-31005, 2009
1622009
Methods, tools and current perspectives in proteogenomics
KV Ruggles, K Krug, X Wang, KR Clauser, J Wang, SH Payne, D Fenyö, ...
Molecular & Cellular Proteomics 16 (6), 959-981, 2017
1532017
Platelets contribute to disease severity in COVID‐19
TJ Barrett, S Bilaloglu, M Cornwell, HM Burgess, VW Virginio, K Drenkova, ...
Journal of Thrombosis and Haemostasis 19 (12), 3139-3153, 2021
1482021
Proteogenomic integration reveals therapeutic targets in breast cancer xenografts
K Huang, S Li, P Mertins, S Cao, HP Gunawardena, KV Ruggles, ...
Nature communications 8 (1), 14864, 2017
1482017
Phosphatidate phosphatase activity plays key role in protection against fatty acid-induced toxicity in yeast
S Fakas, Y Qiu, JL Dixon, GS Han, KV Ruggles, J Garbarino, SL Sturley, ...
Journal of Biological Chemistry 286 (33), 29074-29085, 2011
1422011
A widespread alternate form of cap-dependent mRNA translation initiation
C de la Parra, A Ernlund, A Alard, K Ruggles, B Ueberheide, ...
Nature communications 9 (1), 3068, 2018
1402018
An analysis of the sensitivity of proteogenomic mapping of somatic mutations and novel splicing events in cancer
KV Ruggles, Z Tang, X Wang, H Grover, M Askenazi, J Teubl, S Cao, ...
Molecular & Cellular Proteomics 15 (3), 1060-1071, 2016
1302016
Altered immunity of laboratory mice in the natural environment is associated with fungal colonization
F Yeung, YH Chen, JD Lin, JM Leung, C McCauley, JC Devlin, C Hansen, ...
Cell Host & Microbe 27 (5), 809-822. e6, 2020
1212020
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