Jan-Hendrik Prinz
Jan-Hendrik Prinz
Memorial Sloan Kettering Cancer Center
Bestätigte E-Mail-Adresse bei choderalab.org - Startseite
Titel
Zitiert von
Zitiert von
Jahr
Markov models of molecular kinetics: Generation and validation
JH Prinz, H Wu, M Sarich, B Keller, M Senne, M Held, JD Chodera, ...
The Journal of chemical physics 134 (17), 174105, 2011
8682011
Markov models of molecular kinetics: Generation and validation
JH Prinz, H Wu, M Sarich, B Keller, M Senne, M Held, JD Chodera, ...
The Journal of chemical physics 134 (17), 174105, 2011
8682011
PyEMMA 2: A software package for estimation, validation, and analysis of Markov models
MK Scherer, B Trendelkamp-Schroer, F Paul, G Pérez-Hernández, ...
Journal of chemical theory and computation 11 (11), 5525-5542, 2015
4882015
Projected and hidden Markov models for calculating kinetics and metastable states of complex molecules
F Noé, H Wu, JH Prinz, N Plattner
The Journal of chemical physics 139 (18), 11B609_1, 2013
1222013
Probing molecular kinetics with Markov models: metastable states, transition pathways and spectroscopic observables
JH Prinz, B Keller, F Noé
Physical Chemistry Chemical Physics 13 (38), 16912-16927, 2011
892011
Mechanisms of protein-ligand association and its modulation by protein mutations
M Held, P Metzner, JH Prinz, F Noé
Biophysical journal 100 (3), 701-710, 2011
692011
Dynamical reweighting: Improved estimates of dynamical properties from simulations at multiple temperatures
JD Chodera, WC Swope, F Noé, JH Prinz, MR Shirts, VS Pande
The Journal of chemical physics 134 (24), 06B612, 2011
662011
Optimal use of data in parallel tempering simulations for the construction of discrete-state Markov models of biomolecular dynamics
JH Prinz, JD Chodera, VS Pande, WC Swope, JC Smith, F Noé
The Journal of chemical physics 134 (24), 06B613, 2011
572011
Markov models and dynamical fingerprints: Unraveling the complexity of molecular kinetics
BG Keller, JH Prinz, F Noé
Chemical Physics 396, 92-107, 2012
562012
Markov models and dynamical fingerprints: Unraveling the complexity of molecular kinetics
BG Keller, JH Prinz, F Noé
Chemical Physics 396, 92-107, 2012
562012
Markov state models from short non-equilibrium simulations—Analysis and correction of estimation bias
F Nüske, H Wu, JH Prinz, C Wehmeyer, C Clementi, F Noé
The Journal of Chemical Physics 146 (9), 094104, 2017
452017
OpenPathSampling: A Python framework for path sampling simulations. 1. Basics
DWH Swenson, JH Prinz, F Noe, JD Chodera, PG Bolhuis
Journal of chemical theory and computation 15 (2), 813-836, 2018
33*2018
Spectral rate theory for two-state kinetics
JH Prinz, JD Chodera, F Noé
Physical Review X 4 (1), 011020, 2014
302014
Spectral rate theory for two-state kinetics
JH Prinz, JD Chodera, F Noé
Physical Review X 4 (1), 011020, 2014
302014
Efficient computation, sensitivity, and error analysis of committor probabilities for complex dynamical processes
JH Prinz, M Held, JC Smith, F Noé
Multiscale Modeling & Simulation 9 (2), 545-567, 2011
292011
Dynamic neutron scattering from conformational dynamics. I. Theory and Markov models
B Lindner, Z Yi, JH Prinz, JC Smith, F Noé
The Journal of chemical physics 139 (17), 11B602_1, 2013
232013
Projected metastable Markov processes and their estimation with observable operator models
H Wu, JH Prinz, F Noé
The Journal of chemical physics 143 (14), 10B610_1, 2015
202015
Dynamic neutron scattering from conformational dynamics. II. Application using molecular dynamics simulation and Markov modeling
Z Yi, B Lindner, JH Prinz, F Noé, JC Smith
The Journal of chemical physics 139 (17), 11B601_1, 2013
122013
A robust approach to estimating rates from time-correlation functions
JD Chodera, PJ Elms, WC Swope, JH Prinz, S Marqusee, C Bustamante, ...
arXiv preprint arXiv:1108.2304, 2011
122011
Markov model theory
M Sarich, JH Prinz, C Schütte
An introduction to Markov state models and their application to long …, 2014
92014
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