| An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012 | 13875 | 2012 |
| Whole-animal functional and developmental imaging with isotropic spatial resolution RK Chhetri, F Amat, Y Wan, B Höckendorf, WC Lemon, PJ Keller Nature methods 12 (12), 1171-1178, 2015 | 259 | 2015 |
| Whole-central nervous system functional imaging in larval Drosophila WC Lemon, SR Pulver, B Höckendorf, K McDole, K Branson, J Freeman, ... Nature communications 6 (1), 1-16, 2015 | 212 | 2015 |
| Efficient processing and analysis of large-scale light-sheet microscopy data F Amat, B Höckendorf, Y Wan, WC Lemon, K McDole, PJ Keller Nature protocols 10 (11), 1679-1696, 2015 | 141 | 2015 |
| Fate restriction and multipotency in retinal stem cells L Centanin, B Hoeckendorf, J Wittbrodt Cell stem cell 9 (6), 553-562, 2011 | 90 | 2011 |
| Brain-wide circuit interrogation at the cellular level guided by online analysis of neuronal function N Vladimirov, C Wang, B Höckendorf, A Pujala, M Tanimoto, Y Mu, ... Nature methods 15 (12), 1117-1125, 2018 | 70 | 2018 |
| The centriolar satellite protein SSX2IP promotes centrosome maturation F Bärenz, D Inoue, H Yokoyama, J Tegha-Dunghu, S Freiss, S Draeger, ... Journal of Cell Biology 202 (1), 81-95, 2013 | 69 | 2013 |
| Exclusive multipotency and preferential asymmetric divisions in post-embryonic neural stem cells of the fish retina L Centanin, JJ Ander, B Hoeckendorf, K Lust, T Kellner, I Kraemer, ... Development 141 (18), 3472-3482, 2014 | 67 | 2014 |
| Quantitative analysis of embryogenesis: a perspective for light sheet microscopy B Höckendorf, T Thumberger, J Wittbrodt Developmental Cell 23 (6), 1111-1120, 2012 | 60 | 2012 |
| Repulsive cues combined with physical barriers and cell–cell adhesion determine progenitor cell positioning during organogenesis A Paksa, J Bandemer, B Hoeckendorf, N Razin, K Tarbashevich, S Minina, ... Nature communications 7 (1), 1-14, 2016 | 48 | 2016 |
| Efficient site-specific transgenesis and enhancer activity tests in medaka using PhiC31 integrase S Kirchmaier, B Höckendorf, EK Möller, D Bornhorst, F Spitz, J Wittbrodt Development 140 (20), 4287-4295, 2013 | 35 | 2013 |
| Retinal stem cells modulate proliferative parameters to coordinate post-embryonic morphogenesis in the eye of fish E Tsingos, B Höckendorf, T Sütterlin, S Kirchmaier, N Grabe, L Centanin, ... Elife 8, e42646, 2019 | 29 | 2019 |
| Deltr: digital embryo lineage tree reconstructor X Lou, FO Kaster, MS Lindner, BX Kausler, U Köthe, B Höckendorf, ... 2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro …, 2011 | 26 | 2011 |
| Making biology transparent B Höckendorf, LD Lavis, PJ Keller Nature Biotechnology 32 (11), 1104-1105, 2014 | 6 | 2014 |
| Similarity analysis of cell movements in video microscopy J Fangerau, B Höckendorf, J Wittbrodt, H Leitte 2012 IEEE Symposium on Biological Data Visualization (BioVis), 69-76, 2012 | 4 | 2012 |
| Visualization Software for 3D Video Microscopy: A Design Study. H Leitte, J Fangerau, X Lou, B Höckendorf, S Lemke, A Maizel, J Wittbrodt EuroVis (Short Papers), 2012 | 4 | 2012 |
| Live Imaging of Zebrafish Y Wan, PJ Keller, B Höckendorf Imaging from Cells to Animals In Vivo, 307-324, 2020 | 2 | 2020 |
| Interactive similarity analysis and error detection in large tree collections J Fangerau, B Höckendorf, B Rieck, C Heine, J Wittbrodt, H Leitte Visualization in Medicine and Life Sciences III, 287-307, 2016 | 2 | 2016 |
| Handling Permutation in Sequence Comparison: Genome-Wide Enhancer Prediction in Vertebrates by a Novel Non-Linear Alignment Scoring Principle D Dolle, JL Mateo, MP Eichenlaub, R Sinn, R Reinhardt, B Höckendorf, ... Plos one 10 (10), e0141487, 2015 | 1 | 2015 |
| A Quantitative Clonal Analysis of Adult Neural Stemcells During the Post-embryonic Growth of the Medaka Retina B Höckendorf | 1 | 2014 |
