| High-performance web services for querying gene and variant annotation J Xin, A Mark, C Afrasiabi, G Tsueng, M Juchler, N Gopal, GS Stupp, ... Genome biology 17, 1-7, 2016 | 181 | 2016 |
| Wikidata as a knowledge graph for the life sciences A Waagmeester, G Stupp, S Burgstaller-Muehlbacher, BM Good, M Griffith, ... Elife 9, e52614, 2020 | 123 | 2020 |
| 13C NMR Metabolomics: Applications at Natural Abundance CS Clendinen, B Lee-McMullen, CM Williams, GS Stupp, K Vandenborne, ... Analytical chemistry 86 (18), 9242-9250, 2014 | 94 | 2014 |
| Quantitative metaproteomics and activity-based probe enrichment reveals significant alterations in protein expression from a mouse model of inflammatory bowel disease MD Mayers, C Moon, GS Stupp, AI Su, DW Wolan Journal of proteome research 16 (2), 1014-1026, 2017 | 73 | 2017 |
| Isotopic ratio outlier analysis global metabolomics of Caenorhabditis elegans GS Stupp, CS Clendinen, R Ajredini, MA Szewc, T Garrett, RF Menger, ... Analytical chemistry 85 (24), 11858-11865, 2013 | 70 | 2013 |
| An overview of methods using 13C for improved compound identification in metabolomics and natural products CS Clendinen, GS Stupp, R Ajredini, B Lee-McMullen, C Beecher, ... Frontiers in plant science 6, 611, 2015 | 66 | 2015 |
| Using shape expressions (ShEx) to share RDF data models and to guide curation with rigorous validation K Thornton, H Solbrig, GS Stupp, JE Labra Gayo, D Mietchen, ... The Semantic Web: 16th International Conference, ESWC 2019, Portorož …, 2019 | 62 | 2019 |
| A comprehensive and scalable database search system for metaproteomics S Chatterjee, GS Stupp, SKR Park, JC Ducom, JR Yates, AI Su, ... BMC genomics 17, 1-11, 2016 | 56 | 2016 |
| Chemical Detoxification of Small Molecules by Caenorhabditis elegans GS Stupp, SH von Reuss, Y Izrayelit, R Ajredini, FC Schroeder, AS Edison ACS chemical biology 8 (2), 309-313, 2013 | 47 | 2013 |
| WikiGenomes: an open web application for community consumption and curation of gene annotation data in Wikidata TE Putman, S Lelong, S Burgstaller-Muehlbacher, A Waagmeester, ... Database 2017, bax025, 2017 | 44 | 2017 |
| Whole-genome sequencing and phenotypic analysis of Bacillus subtilis mutants following evolution under conditions of relaxed selection for sporulation CT Brown, LK Fishwick, BM Chokshi, MA Cuff, JM Jackson IV, T Oglesby, ... Applied and environmental microbiology 77 (19), 6867-6877, 2011 | 37 | 2011 |
| Mondo: Unifying diseases for the world, by the world NA Vasilevsky, NA Matentzoglu, S Toro, JE Flack IV, H Hegde, DR Unni, ... medRxiv, 2022.04. 13.22273750, 2022 | 34 | 2022 |
| Quantitative metaproteomics and activity-based protein profiling of patient fecal microbiome identifies host and microbial serine-type endopeptidase activity associated with … PS Thuy-Boun, AY Wang, A Crissien-Martinez, JH Xu, S Chatterjee, ... Molecular & Cellular Proteomics 21 (3), 2022 | 20 | 2022 |
| Metabolomics and natural-products strategies to study chemical ecology in nematodes AS Edison, CS Clendinen, R Ajredini, C Beecher, FV Ponce, GS Stupp Integrative and comparative biology 55 (3), 478-485, 2015 | 18 | 2015 |
| 13C metabolomics: NMR and IROA for unknown identification C S Clendinen, G S Stupp, B Wang, T J Garrett, A S Edison Current Metabolomics 4 (2), 116-120, 2016 | 16 | 2016 |
| ChlamBase: a curated model organism database for the Chlamydia research community T Putman, K Hybiske, D Jow, C Afrasiabi, S Lelong, MA Cano, GS Stupp, ... Database 2019, baz041, 2019 | 13 | 2019 |
| Metaproteomics of colonic microbiota unveils discrete protein functions among colitic mice and control groups C Moon, GS Stupp, AI Su, DW Wolan Proteomics 18 (3-4), 1700391, 2018 | 12 | 2018 |
| Structured reviews for data and knowledge-driven research N Queralt-Rosinach, GS Stupp, TS Li, M Mayers, ME Hoatlin, M Might, ... Database 2020, baaa015, 2020 | 9 | 2020 |
| Triflic acid treatment enables LC-MS/MS analysis of insoluble bacterial biomass AY Wang, PS Thuy-Boun, GS Stupp, AI Su, DW Wolan Journal of proteome research 17 (9), 2978-2986, 2018 | 7 | 2018 |
| Wikidata as a knowledge graph for the life sciences W Andra, G Stupp, BM Sebastian, BM Good, G Malachi, OL Griffith, ... eLife, 2020 | 4 | 2020 |
Chris BeecherCSO, NextGen Matabolomics, Professor Pathology, UM Medical School; Professor Medicinal ChemistryVerified email at beechergroup.org
