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Zhichao (Chichau) Miao
Zhichao (Chichau) Miao
EMBL-EBI, Wellcome Sanger Institute
Verified email at ebi.ac.uk - Homepage
Title
Cited by
Cited by
Year
SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes
W Sungnak, N Huang, C Bécavin, M Berg, R Queen, M Litvinukova, ...
Nature medicine 26 (5), 681-687, 2020
21112020
BBKNN: fast batch alignment of single cell transcriptomes
K Polański, MD Young, Z Miao, KB Meyer, SA Teichmann, JE Park
Bioinformatics 36 (3), 964-965, 2020
2902020
Decoding human fetal liver haematopoiesis
DM Popescu, RA Botting, E Stephenson, K Green, S Webb, L Jardine, ...
Nature 574 (7778), 365-371, 2019
2792019
A test metric for assessing single-cell RNA-seq batch correction
M Büttner, Z Miao, FA Wolf, SA Teichmann, FJ Theis
Nature methods 16 (1), 43-49, 2019
2022019
RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures
Z Miao, RW Adamiak, MF Blanchet, M Boniecki, JM Bujnicki, SJ Chen, ...
Rna 21 (6), 1066-1084, 2015
1602015
RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme
Z Miao, RW Adamiak, M Antczak, RT Batey, AJ Becka, M Biesiada, ...
Rna 23 (5), 655-672, 2017
1582017
Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics
C Muus, MD Luecken, G Eraslan, L Sikkema, A Waghray, G Heimberg, ...
Nature medicine 27 (3), 546-559, 2021
1502021
RNA structure: advances and assessment of 3D structure prediction
Z Miao, E Westhof
Annual review of biophysics 46, 483-503, 2017
1482017
Mutations in signal recognition particle SRP54 cause syndromic neutropenia with Shwachman-Diamond–like features
R Carapito, M Konantz, C Paillard, Z Miao, A Pichot, MS Leduc, Y Yang, ...
The Journal of clinical investigation 127 (11), 4090-4103, 2017
1262017
Secondary structure of the SARS-CoV-2 5’-UTR
Z Miao, A Tidu, G Eriani, F Martin
RNA biology 18 (4), 447-456, 2021
652021
RASP: rapid modeling of protein side chain conformations
Z Miao, Y Cao, T Jiang
Bioinformatics 27 (22), 3117-3122, 2011
652011
Comparative analysis of sequencing technologies for single-cell transcriptomics
KN Natarajan, Z Miao, M Jiang, X Huang, H Zhou, J Xie, C Wang, S Qin, ...
Genome biology 20 (1), 1-8, 2019
632019
RNA structure analysis of human spliceosomes reveals a compact 3D arrangement of snRNAs at the catalytic core
M Anokhina, S Bessonov, Z Miao, E Westhof, K Hartmuth, R Lührmann
The EMBO journal 32 (21), 2804-2818, 2013
622013
A large-scale assessment of nucleic acids binding site prediction programs
Z Miao, E Westhof
PLoS computational biology 11 (12), e1004639, 2015
612015
RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers
Z Miao, RW Adamiak, M Antczak, MJ Boniecki, J Bujnicki, SJ Chen, ...
RNA 26 (8), 982-995, 2020
582020
Improved side-chain modeling by coupling clash-detection guided iterative search with rotamer relaxation
Y Cao, L Song, Z Miao, Y Hu, L Tian, T Jiang
Bioinformatics 27 (6), 785-790, 2011
542011
Putative cell type discovery from single-cell gene expression data
Z Miao, P Moreno, N Huang, I Papatheodorou, A Brazma, SA Teichmann
Nature methods 17 (6), 621-628, 2020
502020
Prediction of nucleic acid binding probability in proteins: a neighboring residue network based score
Z Miao, E Westhof
Nucleic acids research 43 (11), 5340-5351, 2015
472015
Genome-wide analyses reveal the IRE1a-XBP1 pathway promotes T helper cell differentiation by resolving secretory stress and accelerating proliferation
J Pramanik, X Chen, G Kar, J Henriksson, T Gomes, JE Park, K Natarajan, ...
Genome medicine 10 (1), 1-19, 2018
372018
Advances in RNA 3D structure modeling using experimental data
B Li, Y Cao, E Westhof, Z Miao
Frontiers in genetics 11, 574485, 2020
362020
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Articles 1–20