| RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures Z Miao, RW Adamiak, MF Blanchet, M Boniecki, JM Bujnicki, SJ Chen, ... Rna 21 (6), 1066-1084, 2015 | 106 | 2015 |
| RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme Z Miao, RW Adamiak, M Antczak, RT Batey, AJ Becka, M Biesiada, ... Rna 23 (5), 655-672, 2017 | 78 | 2017 |
| RNA structure analysis of human spliceosomes reveals a compact 3D arrangement of snRNAs at the catalytic core M Anokhina, S Bessonov, Z Miao, E Westhof, K Hartmuth, R Lührmann The EMBO journal 32 (21), 2804-2818, 2013 | 60 | 2013 |
| RNA structure: advances and assessment of 3D structure prediction Z Miao, E Westhof Annual review of biophysics 46, 483-503, 2017 | 59 | 2017 |
| RASP: rapid modeling of protein side chain conformations Z Miao, Y Cao, T Jiang Bioinformatics 27 (22), 3117-3122, 2011 | 55 | 2011 |
| A test metric for assessing single-cell RNA-seq batch correction M Büttner, Z Miao, FA Wolf, SA Teichmann, FJ Theis Nature methods 16 (1), 43-49, 2019 | 51 | 2019 |
| Mutations in signal recognition particle SRP54 cause syndromic neutropenia with Shwachman-Diamond–like features R Carapito, M Konantz, C Paillard, Z Miao, A Pichot, MS Leduc, Y Yang, ... The Journal of clinical investigation 127 (11), 4090-4103, 2017 | 40 | 2017 |
| Prediction of nucleic acid binding probability in proteins: a neighboring residue network based score Z Miao, E Westhof Nucleic acids research 43 (11), 5340-5351, 2015 | 40 | 2015 |
| Improved side-chain modeling by coupling clash-detection guided iterative search with rotamer relaxation Y Cao, L Song, Z Miao, Y Hu, L Tian, T Jiang Bioinformatics 27 (6), 785-790, 2011 | 38 | 2011 |
| A large-scale assessment of nucleic acids binding site prediction programs Z Miao, E Westhof PLoS computational biology 11 (12), e1004639, 2015 | 36 | 2015 |
| BBKNN: fast batch alignment of single cell transcriptomes K Polański, MD Young, Z Miao, KB Meyer, SA Teichmann, JE Park Bioinformatics 36 (3), 964-965, 2020 | 23 | 2020 |
| Decoding human fetal liver haematopoiesis DM Popescu, RA Botting, E Stephenson, K Green, S Webb, L Jardine, ... Nature 574 (7778), 365-371, 2019 | 16 | 2019 |
| Genome-wide analyses reveal the IRE1a-XBP1 pathway promotes T helper cell differentiation by resolving secretory stress and accelerating proliferation J Pramanik, X Chen, G Kar, J Henriksson, T Gomes, JE Park, K Natarajan, ... Genome medicine 10 (1), 1-19, 2018 | 12 | 2018 |
| Assessment of batch-correction methods for scRNA-seq data with a new test metric M Büttner, Z Miao, FA Wolf, SA Teichmann, FJ Theis BioRxiv, 200345, 2017 | 12 | 2017 |
| Comparative analysis of sequencing technologies for single-cell transcriptomics KN Natarajan, Z Miao, M Jiang, X Huang, H Zhou, J Xie, C Wang, S Qin, ... Genome biology 20 (1), 70, 2019 | 10 | 2019 |
| Quantifying side-chain conformational variations in protein structure Z Miao, Y Cao Scientific reports 6 (1), 1-10, 2016 | 10 | 2016 |
| RBscore&NBench: a high-level web server for nucleic acid binding residues prediction with a large-scale benchmarking database Z Miao, E Westhof Nucleic acids research 44 (W1), W562-W567, 2016 | 9 | 2016 |
| Modeling of protein side-chain conformations with RASP Z Miao, Y Cao, T Jiang Protein Structure Prediction, 43-53, 2014 | 4 | 2014 |
| Evaluation of Protein–Ligand Docking by Cyscore Y Cao, W Dai, Z Miao Computational Drug Discovery and Design, 233-243, 2018 | 2 | 2018 |
| Assessment of batch-correction methods for scRNA-seq data with a new test metric. bioRxiv M Büttner, Z Miao, A Wolf, SA Teichmann, FJ Theis October, 2017 | 2 | 2017 |
