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Yusuke Okazaki
Yusuke Okazaki
Kyoto University
Bestätigte E-Mail-Adresse bei kuicr.kyoto-u.ac.jp - Startseite
Titel
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Zitiert von
Jahr
Hidden in plain sight—highly abundant and diverse planktonic freshwater Chloroflexi
M Mehrshad, MM Salcher, Y Okazaki, S Nakano, K Šimek, AS Andrei, ...
Microbiome 6, 1-13, 2018
1002018
Ubiquity and quantitative significance of bacterioplankton lineages inhabiting the oxygenated hypolimnion of deep freshwater lakes
Y Okazaki, S Fujinaga, A Tanaka, A Kohzu, H Oyagi, S Nakano
The ISME journal 11 (10), 2279-2293, 2017
632017
A novel alphaproteobacterial ectosymbiont promotes the growth of the hydrocarbon-rich green alga Botryococcus braunii
Y Tanabe, Y Okazaki, M Yoshida, H Matsuura, A Kai, T Shiratori, K Ishida, ...
Scientific reports 5, 10467, 2015
522015
Long-read metagenomics using PromethION uncovers oral bacteriophages and their interaction with host bacteria
K Yahara, M Suzuki, A Hirabayashi, W Suda, M Hattori, Y Suzuki, ...
Nature communications 12 (1), 27, 2021
512021
Genome‐resolved viral and cellular metagenomes revealed potential key virus‐host interactions in a deep freshwater lake
Y Okazaki, Y Nishimura, T Yoshida, H Ogata, S Nakano
Environmental microbiology 21 (12), 4740-4754, 2019
502019
Seasonal dominance of CL500-11 bacterioplankton (phylum Chloroflexi) in the oxygenated hypolimnion of Lake Biwa, Japan
Y Okazaki, Y Hodoki, S Nakano
FEMS microbiology ecology 83 (1), 82-92, 2013
482013
Metaepigenomic analysis reveals the unexplored diversity of DNA methylation in an environmental prokaryotic community
S Hiraoka, Y Okazaki, M Anda, A Toyoda, S Nakano, W Iwasaki
Nature communications 10 (1), 159, 2019
432019
Vertical partitioning of freshwater bacterioplankton community in a deep mesotrophic lake with a fully oxygenated hypolimnion (Lake Biwa, Japan)
Y Okazaki, SI Nakano
Environmental Microbiology Reports 8 (5), 780-788, 2016
432016
Ecogenomics sheds light on diverse lifestyle strategies in freshwater CPR
MC Chiriac, PA Bulzu, AS Andrei, Y Okazaki, S Nakano, M Haber, ...
Microbiome 10 (1), 84, 2022
282022
Microdiversity and phylogeographic diversification of bacterioplankton in pelagic freshwater systems revealed through long-read amplicon sequencing
Y Okazaki, S Fujinaga, MM Salcher, C Callieri, A Tanaka, A Kohzu, ...
Microbiome 9 (1), 1-15, 2021
212021
Widespread dominance of kinetoplastids and unexpected presence of diplonemids in deep freshwater lakes
I Mukherjee, Y Hodoki, Y Okazaki, S Fujinaga, K Ohbayashi, S Nakano
Frontiers in Microbiology 10, 2375, 2019
202019
The broad habitat spectrum of the CL500-11 lineage (phylum Chloroflexi), a dominant bacterioplankton in oxygenated hypolimnia of deep freshwater lakes
Y Okazaki, MM Salcher, C Callieri, S Nakano
Frontiers in microbiology 9, 418432, 2018
182018
Long-read-resolved, ecosystem-wide exploration of nucleotide and structural microdiversity of lake bacterioplankton genomes
Y Okazaki, S Nakano, A Toyoda, H Tamaki
mSystems 7 (4), e00433-22, 2022
142022
Distributions and geochemical behaviors of oxyanion-forming trace elements and uranium in the Hövsgöl–Baikal–Yenisei water system of Mongolia and Russia
A Mochizuki, T Murata, K Hosoda, T Katano, Y Tanaka, T Mimura, ...
Journal of Geochemical Exploration 188, 123-136, 2018
102018
A 1.5-Mb continuous endogenous viral region in the arbuscular mycorrhizal fungus Rhizophagus irregularis
H Zhao, R Zhang, J Wu, L Meng, Y Okazaki, H Hikida, H Ogata
Virus Evolution 9 (2), vead064, 2023
62023
Facilitative interaction networks in experimental microbial community dynamics
H Fujita, M Ushio, K Suzuki, MS Abe, M Yamamichi, Y Okazaki, ...
Frontiers in Microbiology 14, 1153952, 2023
52023
A rapid genome‐wide analysis of isolated giant viruses using MinION sequencing
H Hikida, Y Okazaki, R Zhang, TT Nguyen, H Ogata
Environmental Microbiology 25 (11), 2621-2635, 2023
42023
Metagenomic analysis of ecological niche overlap and community collapse in microbiome dynamics
H Fujita, M Ushio, K Suzuki, MS Abe, M Yamamichi, Y Okazaki, ...
Frontiers in Microbiology 14, 1261137, 2023
22023
A Fast and Easy Method to Co-extract DNA and RNA from an Environmental Microbial Sample
Y Okazaki, TT Nguyen, A Nishihara, H Endo, H Ogata, S Nakano, ...
Microbes and Environments 38 (1), ME22102, 2023
22023
Characterization of a bloom-associated alphaproteobacterial lineage, ‘Candidatus Phycosocius’: insights into freshwater algal-bacterial interactions
Y Tanabe, H Yamaguchi, M Yoshida, A Kai, Y Okazaki
ISME Communications 3 (1), 20, 2023
12023
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