Persistence images: A stable vector representation of persistent homology H Adams, T Emerson, M Kirby, R Neville, C Peterson, P Shipman, ... Journal of Machine Learning Research 18, 2017 | 455 | 2017 |

An intrinsic oscillator drives the blood stage cycle of the malaria parasite Plasmodium falciparum LM Smith, FC Motta, G Chopra, JK Moch, RR Nerem, B Cummins, ... Science 368 (6492), 754-759, 2020 | 38 | 2020 |

Highly ordered nanoscale surface ripples produced by ion bombardment of binary compounds FC Motta, PD Shipman, RM Bradley Journal of Physics D: Applied Physics 45 (12), 122001, 2012 | 36 | 2012 |

Theory of nanoscale pattern formation produced by oblique-incidence ion bombardment of binary compounds FC Motta, PD Shipman, RM Bradley Physical Review B 90 (8), 085428, 2014 | 19 | 2014 |

Conservation and diversification of circadian rhythmicity between a model crassulacean acid metabolism plant Kalanchoë fedtschenkoi and a model C3 photosynthesis plant … RC Moseley, R Mewalal, F Motta, GA Tuskan, S Haase, X Yang Frontiers in plant science 9, 1757, 2018 | 14 | 2018 |

Producing nanodot arrays with improved hexagonal order by patterning surfaces before ion sputtering DA Pearson, RM Bradley, FC Motta, PD Shipman Physical Review E 92 (6), 062401, 2015 | 14 | 2015 |

Persistence images: An alternative persistent homology representation S Chepushtanova, T Emerson, E Hanson, M Kirby, F Motta, R Neville, ... arXiv preprint arXiv:1507.06217 7, 2015 | 14 | 2015 |

Layers of regulation of cell-cycle gene expression in the budding yeast *Saccharomyces cerevisiae*CM Kelliher, MW Foster, FC Motta, A Deckard, EJ Soderblom, ... Molecular biology of the cell 29 (22), 2644-2655, 2018 | 12 | 2018 |

Reconciling conflicting models for global control of cell-cycle transcription CY Cho, FC Motta, CM Kelliher, A Deckard, SB Haase Cell Cycle 16 (20), 1965-1978, 2017 | 12 | 2017 |

Random cyclic dynamical systems M Adamaszek, H Adams, F Motta Advances in Applied Mathematics 83, 1-23, 2017 | 11 | 2017 |

Measures of order for nearly hexagonal lattices FC Motta, R Neville, PD Shipman, DA Pearson, RM Bradley Physica D: Nonlinear Phenomena 380, 17-30, 2018 | 7 | 2018 |

Optimally topologically transitive orbits in discrete dynamical systems FC Motta, PD Shipman, BD Springer The American Mathematical Monthly 123 (2), 115-135, 2016 | 7 | 2016 |

Large-scale design and refinement of stable proteins using sequence-only models JM Singer, S Novotney, D Strickland, HK Haddox, N Leiby, GJ Rocklin, ... PloS one 17 (3), e0265020, 2022 | 6 | 2022 |

Benefits of surveillance testing and quarantine in a SARS-CoV-2 vaccinated population of students on a university campus FC Motta, KA McGoff, A Deckard, CR Wolfe, MA Moody, K Cavanaugh, ... medRxiv, 2021 | 5 | 2021 |

Assessment of simulated surveillance testing and quarantine in a SARS-CoV-2–vaccinated population of students on a university campus FC Motta, KA McGoff, A Deckard, CR Wolfe, M Bonsignori, MA Moody, ... JAMA Health Forum 2 (10), e213035-e213035, 2021 | 4 | 2021 |

Topological data analysis: developments and applications FC Motta Advances in Nonlinear Geosciences, 369-391, 2018 | 4 | 2018 |

Conservation of dynamic characteristics of transcriptional regulatory elements in periodic biological processes FC Motta, RC Moseley, B Cummins, A Deckard, SB Haase BMC bioinformatics 23 (1), 1-20, 2022 | 3 | 2022 |

Geometric methods in the study of the snow surface roughness SR Fassnacht, I Oprea, P Shipman, J Kirkpatrick, G Borleske, F Motta, ... Hydrology Days-Department of Civil and Environmental Engineering, 2015 | 3 | 2015 |

Critical and Ictal Phases in Simulated EEG Signals on a Small-World Network LR Nemzer, GD Cravens, RM Worth, F Motta, A Placzek, V Castro, JQ Lou Frontiers in Computational Neuroscience 14, 120, 2021 | 2 | 2021 |

An Unoriented Variation on de Bruijn Sequences CS Burris, FC Motta, PD Shipman Graphs and Combinatorics 33 (4), 845-858, 2017 | 2 | 2017 |