James Robinson
James Robinson
Verified email at ucsd.edu
Title
Cited by
Cited by
Year
Integrative genomics viewer
JT Robinson, H Thorvaldsdóttir, W Winckler, M Guttman, ES Lander, ...
Nature biotechnology 29 (1), 24-26, 2011
68722011
Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
H Thorvaldsdóttir, JT Robinson, JP Mesirov
Briefings in bioinformatics 14 (2), 178-192, 2013
48382013
A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping
SSP Rao, MH Huntley, NC Durand, EK Stamenova, ID Bochkov, ...
Cell 159 (7), 1665-1680, 2014
31972014
Discovery and saturation analysis of cancer genes across 21 tumour types
MS Lawrence, P Stojanov, CH Mermel, JT Robinson, LA Garraway, ...
Nature 505 (7484), 495-501, 2014
20722014
Ab initio reconstruction of cell type–specific transcriptomes in mouse reveals the conserved multi-exonic structure of lincRNAs
M Guttman, M Garber, JZ Levin, J Donaghey, J Robinson, X Adiconis, ...
Nature biotechnology 28 (5), 503-510, 2010
12652010
Characterizing the cancer genome in lung adenocarcinoma
BA Weir, MS Woo, G Getz, S Perner, L Ding, R Beroukhim, WM Lin, ...
Nature 450 (7171), 893-898, 2007
11292007
Cohesin loss eliminates all loop domains
SSP Rao, SC Huang, BG St Hilaire, JM Engreitz, EM Perez, ...
Cell 171 (2), 305-320. e24, 2017
6042017
A high-throughput chromatin immunoprecipitation approach reveals principles of dynamic gene regulation in mammals
M Garber, N Yosef, A Goren, R Raychowdhury, A Thielke, M Guttman, ...
Molecular cell 47 (5), 810-822, 2012
3422012
Juicebox provides a visualization system for Hi-C contact maps with unlimited zoom
NC Durand, JT Robinson, MS Shamim, I Machol, JP Mesirov, ES Lander, ...
Cell systems 3 (1), 99-101, 2016
3392016
Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder
RKC Yuen, D Merico, M Bookman, JL Howe, B Thiruvahindrapuram, ...
Nature neuroscience 20 (4), 602-611, 2017
3262017
Integrative analysis of the melanoma transcriptome
MF Berger, JZ Levin, K Vijayendran, A Sivachenko, X Adiconis, J Maguire, ...
Genome research 20 (4), 413-427, 2010
3052010
Thorvaldsdó ttir
JT Robinson
H., Winckler, W., Guttman, M., Lander, ES, Getz, G., and Mesirov, JP, 24-26, 2011
2992011
RNA duplex map in living cells reveals higher-order transcriptome structure
Z Lu, QC Zhang, B Lee, RA Flynn, MA Smith, JT Robinson, C Davidovich, ...
Cell 165 (5), 1267-1279, 2016
2852016
Mutations causing medullary cystic kidney disease type 1 lie in a large VNTR in MUC1 missed by massively parallel sequencing
A Kirby, A Gnirke, DB Jaffe, V Barešová, N Pochet, B Blumenstiel, C Ye, ...
Nature genetics 45 (3), 299-303, 2013
1812013
Variant review with the integrative genomics viewer
JT Robinson, H Thorvaldsdóttir, AM Wenger, A Zehir, JP Mesirov
Cancer research 77 (21), e31-e34, 2017
1452017
Quantitative visualization of alternative exon expression from RNA-seq data
Y Katz, ET Wang, J Silterra, S Schwartz, B Wong, H Thorvaldsdóttir, ...
Bioinformatics 31 (14), 2400-2402, 2015
932015
Postoperative complications in the Ahmed Baerveldt comparison study during five years of follow-up
DL Budenz, WJ Feuer, K Barton, J Schiffman, VP Costa, DG Godfrey, ...
American journal of ophthalmology 163, 75-82. e3, 2016
742016
Factors influencing the production of extracellular polymeric substances by Rhodopseudomonas acidophila
GP Sheng, HQ Yu, Z Yue
International biodeterioration & biodegradation 58 (2), 89-93, 2006
722006
Juicebox. js provides a cloud-based visualization system for Hi-C data
JT Robinson, D Turner, NC Durand, H Thorvaldsdóttir, JP Mesirov, ...
Cell systems 6 (2), 256-258. e1, 2018
492018
Toxocara canis‐induced murine pulmonary inflammation: analysis of cells and proteins in lung tissue and bronchoalveolar lavage fluid
J Buijs, WH Lokhorst, J Robinson, FP Nijkamp
Parasite immunology 16 (1), 1-9, 1994
481994
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Articles 1–20