Pavlo Lutsik
Pavlo Lutsik
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Comprehensive analysis of DNA methylation data with RnBeads
Y Assenov, F Müller, P Lutsik, J Walter, T Lengauer, C Bock
Nature methods 11 (11), 1138-1140, 2014
RnBeads 2.0: comprehensive analysis of DNA methylation data
F Müller, M Scherer, Y Assenov, P Lutsik, J Walter, T Lengauer, C Bock
Genome biology 20, 1-12, 2019
Molecular evolution of early-onset prostate cancer identifies molecular risk markers and clinical trajectories
C Gerhauser, F Favero, T Risch, R Simon, L Feuerbach, Y Assenov, ...
Cancer cell 34 (6), 996-1011. e8, 2018
DNA methylation analysis on purified neurons and glia dissects age and Alzheimer’s disease-specific changes in the human cortex
G Gasparoni, S Bultmann, P Lutsik, TFJ Kraus, S Sordon, J Vlcek, ...
Epigenetics & chromatin 11, 1-19, 2018
Enhancer hijacking activates oncogenic transcription factor NR4A3 in acinic cell carcinomas of the salivary glands
F Haller, M Bieg, R Will, C Körner, D Weichenhan, A Bott, N Ishaque, ...
Nature communications 10 (1), 368, 2019
BiQ Analyzer HT: locus-specific analysis of DNA methylation by high-throughput bisulfite sequencing
P Lutsik, L Feuerbach, J Arand, T Lengauer, J Walter, C Bock
Nucleic acids research 39 (suppl_2), W551-W556, 2011
Assisted reproductive technologies do not enhance the variability of DNA methylation imprints in human
S Tierling, NY Souren, J Gries, C LoPorto, M Groth, P Lutsik, H Neitzel, ...
Journal of medical genetics 47 (6), 371-376, 2010
MeDeCom: discovery and quantification of latent components of heterogeneous methylomes
P Lutsik, M Slawski, G Gasparoni, N Vedeneev, M Hein, J Walter
Genome biology 18, 1-20, 2017
Integrative analysis defines distinct prognostic subgroups of intrahepatic cholangiocarcinoma
B Goeppert, R Toth, S Singer, T Albrecht, DB Lipka, P Lutsik, D Brocks, ...
Hepatology 69 (5), 2091-2106, 2019
DNA methylation signatures of monozygotic twins clinically discordant for multiple sclerosis
NY Souren, LA Gerdes, P Lutsik, G Gasparoni, E Beltrán, A Salhab, ...
Nature communications 10 (1), 2094, 2019
Neuronal ensemble-specific DNA methylation strengthens engram stability
K Gulmez Karaca, J Kupke, DVC Brito, B Zeuch, C Thome, D Weichenhan, ...
Nature communications 11 (1), 639, 2020
Epigenetic reprogramming of airway macrophages promotes polarization and inflammation in muco-obstructive lung disease
J Hey, M Paulsen, R Toth, D Weichenhan, S Butz, J Schatterny, R Liebers, ...
Nature Communications 12 (1), 6520, 2021
Adult monozygotic twins discordant for intra-uterine growth have indistinguishable genome-wide DNA methylation profiles
NYP Souren, P Lutsik, G Gasparoni, S Tierling, J Gries, ...
Genome biology 14, 1-15, 2013
Matrix factorization with binary components
M Slawski, M Hein, P Lutsik
Advances in neural information processing systems 26, 2013
Epigenome data release: a participant-centered approach to privacy protection
SOM Dyke, WA Cheung, Y Joly, O Ammerpohl, P Lutsik, MA Rothstein, ...
Genome biology 16, 1-12, 2015
Globally altered epigenetic landscape and delayed osteogenic differentiation in H3. 3-G34W-mutant giant cell tumor of bone
P Lutsik, A Baude, D Mancarella, S Öz, A Kühn, R Toth, J Hey, UH Toprak, ...
Nature communications 11 (1), 5414, 2020
Guidelines for cell-type heterogeneity quantification based on a comparative analysis of reference-free DNA methylation deconvolution software
C Decamps, F Privé, R Bacher, D Jost, A Waguet, EA Houseman, E Lurie, ...
BMC bioinformatics 21, 1-15, 2020
Bi-PROF: bisulfite profiling of target regions using 454 GS FLX Titanium technology
J Gries, D Schumacher, J Arand, P Lutsik, MR Markelova, I Fichtner, ...
Epigenetics 8 (7), 765-771, 2013
The GAPDH redox switch safeguards reductive capacity and enables survival of stressed tumour cells
D Talwar, CG Miller, J Grossmann, L Szyrwiel, T Schwecke, V Demichev, ...
Nature Metabolism 5 (4), 660-676, 2023
Histone H3K27 demethylase KDM6A is an epigenetic gatekeeper of mTORC1 signalling in cancer
S Revia, A Seretny, L Wendler, A Banito, C Eckert, K Breuer, ...
Gut 71 (8), 1613-1628, 2022
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