| Long-read sequencing of 3,622 Icelanders provides insight into the role of structural variants in human diseases and other traits D Beyter, H Ingimundardottir, A Oddsson, HP Eggertsson, E Bjornsson, ... Nature Genetics 53 (6), 779-786, 2021 | 83* | 2021 |
| Bloom Filter Trie: an alignment-free and reference-free data structure for pan-genome storage G Holley, R Wittler, J Stoye Algorithms for Molecular Biology 11 (1), 1-9, 2016 | 71 | 2016 |
| Bifrost: highly parallel construction and indexing of colored and compacted de Bruijn graphs G Holley, P Melsted Genome biology 21 (1), 1-20, 2020 | 53 | 2020 |
| Pan-genome storage and analysis techniques T Zekic, G Holley, J Stoye Comparative Genomics, 29-53, 2018 | 20 | 2018 |
| Dynamic alignment-free and reference-free read compression G Holley, R Wittler, J Stoye, F Hach Journal of Computational Biology 25 (7), 825-836, 2018 | 16 | 2018 |
| Ratatosk: hybrid error correction of long reads enables accurate variant calling and assembly G Holley, D Beyter, H Ingimundardottir, PL Møller, S Kristmundsdottir, ... Genome Biology 22 (1), 1-22, 2021 | 11 | 2021 |
| BlastGraph: intensive approximate pattern matching in string graphs and de-Bruijn graphs G Holley, P Peterlongo PSC 2012, 2012 | 10 | 2012 |
| BlastFrost: fast querying of 100,000 s of bacterial genomes in Bifrost graphs N Luhmann, G Holley, M Achtman Genome biology 22 (1), 1-15, 2021 | 8 | 2021 |
| The sequences of 150,119 genomes in the UK biobank BV Halldorsson, HP Eggertsson, KHS Moore, H Hauswedell, O Eiriksson, ... bioRxiv, 2021 | 2 | 2021 |
| Benchmarking small variant detection with ONT reveals high performance in challenging regions PL Møller, G Holley, D Beyter, M Nyegaard, BV Halldórsson bioRxiv, 2020 | 1 | 2020 |
| Population-scale detection of non-reference sequence variants using colored de Bruijn Graphs T Krannich, WTJ White, S Niehus, G Holley, BV Halldórsson, B Kehr Bioinformatics 38 (3), 604-611, 2022 | | 2022 |
| Pan-genome Search and Storage G Holley | | 2018 |
