Maren Büttner
Maren Büttner
Senior Data Scientist at Calico Life Sciences
Verified email at
Cited by
Cited by
Diffusion Pseudotime robustly reconstructs lineage branching
L Haghverdi, M Büttner, FA Wolf, F Buettner, FJ Theis
Nature Methods, 845–848, 2016
destiny: diffusion maps for large-scale single-cell data in R
P Angerer, L Haghverdi, M Büttner, FJ Theis, C Marr, F Buettner
Bioinformatics 32 (8), 1241-1243, 2016
Benchmarking atlas-level data integration in single-cell genomics
MD Luecken, M Büttner, K Chaichoompu, A Danese, M Interlandi, ...
Nature Methods, 2021
A test metric for assessing single-cell RNA-seq batch correction
M Büttner, Z Miao, FA Wolf, SA Teichmann, FJ Theis
Nature Methods 16, 43-49, 2019
Mapping single-cell data to reference atlases by transfer learning
M Lotfollahi, M Naghipourfar, MD Luecken, M Khajavi, M Büttner, ...
Nature biotechnology 40 (1), 121-130, 2022
Concepts and limitations for learning developmental trajectories from single cell genomics
S Tritschler, M Büttner, DS Fischer, M Lange, V Bergen, H Lickert, ...
Development 146 (12), dev170506, 2019
scCODA is a Bayesian model for compositional single-cell data analysis
M Büttner, J Ostner, M Christian L, FJ Theis, B Schubert
Nature Communications 12, 2021
Best practices for single-cell analysis across modalities
L Heumos, AC Schaar, C Lance, A Litinetskaya, F Drost, L Zappia, ...
Nature Reviews Genetics, 1-23, 2023
Non-canonical Wnt/PCP signalling regulates intestinal stem cell lineage priming towards enteroendocrine and Paneth cell fates
A Böttcher, M Büttner, S Tritschler, M Sterr, A Aliluev, L Oppenländer, ...
Nature cell biology 23 (1), 23-31, 2021
Aldh1b1 expression defines progenitor cells in the adult pancreas and is required for Kras-induced pancreatic cancer
PNAS, 2019
Transition state and ground state properties of the helix–coil transition in peptides deduced from high-pressure studies
S Neumaier, M Büttner, A Bachmann, T Kiefhaber
Proceedings of the National Academy of Sciences 110 (52), 20988-20993, 2013
Epithelial cell plasticity drives endoderm formation during gastrulation
K Scheibner, S Schirge, I Burtscher, M Büttner, M Sterr, D Yang, ...
Nature Cell Biology, 2021
Testing the diffusing boundary model for the helix–coil transition in peptides
S Neumaier, A Reiner, M Büttner, B Fierz, T Kiefhaber
Proceedings of the National Academy of Sciences 110 (32), 12905-12910, 2013
CD81 marks immature and dedifferentiated pancreatic β-cells
C Salinno, M Büttner, P Cota, S Tritschler, M Tarquis-Medina, ...
Molecular Metabolism, 2021
The scverse project provides a computational ecosystem for single-cell omics data analysis
I Virshup, D Bredikhin, L Heumos, G Palla, G Sturm, A Gayoso, I Kats, ...
Nature biotechnology, 1-3, 2023
Deep learning does not outperform classical machine learning for cell-type annotation
ND Köhler, M Büttner, FJ Theis
bioRxiv, 2019
An exhausted phenotype of TH2 cells is primed by allergen exposure, but not reinforced by allergen-specific immunotherapy
SH Wang, UM Zissler, M Büttner, S Heine, A Heldner, S Kotz, L Pechtold, ...
Allergy, 2021
Distinct molecular profiles of skull bone marrow in health and neurological disorders
ZI Kolabas, LB Kuemmerle, R Perneczky, B Förstera, S Ulukaya, M Ali, ...
Cell 186 (17), 3706-3725. e29, 2023
A pulmonologist's guide to perform and analyse cross-species single lung cell transcriptomics
P Pennitz, H Kirsten, VD Friedrich, E Wyler, C Goekeri, B Obermayer, ...
European Respiratory Review 31 (165), 2022
Heterogeneous Development of β-Cell Populations in Diabetes-Resistant and-Susceptible Mice
P Gottmann, T Speckmann, M Stadion, E Zuljan, H Aga, M Sterr, M Büttner, ...
Diabetes 71 (9), 1962-1978, 2022
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