| Broad host range of SARS-CoV-2 predicted by comparative and structural analysis of ACE2 in vertebrates J Damas, GM Hughes, KC Keough, CA Painter, NS Persky, M Corbo, ... Proceedings of the National Academy of Sciences 117 (36), 22311-22322, 2020 | 624 | 2020 |
| Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms DE Gordon, J Hiatt, M Bouhaddou, VV Rezelj, S Ulferts, H Braberg, ... Science 370 (6521), eabe9403, 2020 | 608 | 2020 |
| Single-cell epigenomics reveals mechanisms of human cortical development RS Ziffra, CN Kim, JM Ross, A Wilfert, TN Turner, M Haeussler, ... Nature 598 (7879), 205-213, 2021 | 159 | 2021 |
| Evolutionary constraint and innovation across hundreds of placental mammals MJ Christmas, IM Kaplow, DP Genereux, MX Dong, GM Hughes, X Li, ... Science 380 (6643), eabn3943, 2023 | 69 | 2023 |
| Immunoreceptor tyrosine-based inhibitory motif (ITIM)-mediated inhibitory signaling is regulated by sequential phosphorylation mediated by distinct nonreceptor tyrosine kinases … BE Tourdot, MK Brenner, KC Keough, T Holyst, PJ Newman, DK Newman Biochemistry 52 (15), 2597-2608, 2013 | 54 | 2013 |
| A genomic timescale for placental mammal evolution NM Foley, VC Mason, AJ Harris, KR Bredemeyer, J Damas, HA Lewin, ... Science 380 (6643), eabl8189, 2023 | 42 | 2023 |
| Massively parallel dissection of human accelerated regions in human and chimpanzee neural progenitors H Ryu, F Inoue, S Whalen, A Williams, M Kircher, B Martin, B Alvarado, ... BioRxiv 256313, 2018 | 40 | 2018 |
| Integrating gene annotation with orthology inference at scale BM Kirilenko, C Munegowda, E Osipova, D Jebb, V Sharma, M Blumer, ... Science 380 (6643), eabn3107, 2023 | 37 | 2023 |
| Leveraging base-pair mammalian constraint to understand genetic variation and human disease PF Sullivan, JRS Meadows, S Gazal, BDN Phan, X Li, DP Genereux, ... Science 380 (6643), eabn2937, 2023 | 36 | 2023 |
| Machine learning dissection of human accelerated regions in primate neurodevelopment S Whalen, F Inoue, H Ryu, T Fair, E Markenscoff-Papadimitriou, K Keough, ... Neuron 111 (6), 857-873. e8, 2023 | 36 | 2023 |
| Three-dimensional genome rewiring in loci with human accelerated regions KC Keough, S Whalen, F Inoue, PF Przytycki, T Fair, C Deng, M Steyert, ... Science 380 (6643), eabm1696, 2023 | 27 | 2023 |
| AlleleAnalyzer: a tool for personalized and allele-specific sgRNA design KC Keough, S Lyalina, MP Olvera, S Whalen, BR Conklin, KS Pollard Genome biology 20, 1-9, 2019 | 27 | 2019 |
| Insights into mammalian TE diversity through the curation of 248 genome assemblies AB Osmanski, NS Paulat, J Korstian, JR Grimshaw, M Halsey, ... Science 380 (6643), eabn1430, 2023 | 26 | 2023 |
| Mammalian evolution of human cis-regulatory elements and transcription factor binding sites G Andrews, K Fan, HE Pratt, N Phalke, Zoonomia Consortium §, ... Science 380 (6643), eabn7930, 2023 | 25 | 2023 |
| The contribution of historical processes to contemporary extinction risk in placental mammals AP Wilder, MA Supple, A Subramanian, A Mudide, R Swofford, ... Science 380 (6643), eabn5856, 2023 | 24 | 2023 |
| Relating enhancer genetic variation across mammals to complex phenotypes using machine learning IM Kaplow, AJ Lawler, DE Schäffer, C Srinivasan, HH Sestili, ME Wirthlin, ... Science 380 (6643), eabm7993, 2023 | 23 | 2023 |
| An atlas of lamina-associated chromatin across twelve human cell types reveals an intermediate chromatin subtype PP Shah, KC Keough, K Gjoni, GT Santini, RJ Abdill, NM Wickramasinghe, ... Genome biology 24 (1), 16, 2023 | 20 | 2023 |
| The functional and evolutionary impacts of human-specific deletions in conserved elements JR Xue, A Mackay-Smith, K Mouri, MF Garcia, MX Dong, JF Akers, ... Science 380 (6643), eabn2253, 2023 | 16 | 2023 |
| Reconstructing the 3D genome organization of Neanderthals reveals that chromatin folding shaped phenotypic and sequence divergence E McArthur, DC Rinker, EN Gilbertson, G Fudenberg, M Pittman, ... Biorxiv, 2022.02. 07.479462, 2022 | 15 | 2022 |
| ASEPTIC MENINGITIS OUTBREAK ASSOCIATED WITH ECHOVIRUS 30 AMONG HIGH SCHOOL FOOTBALL PLAYERS LOS ANGELES COUNTY, CALIFORNIA 2014 C Croker, K Keough, MPH Van Ngo, A Marutani, R Civen Special Studies Report 5, 25, 2015 | 13 | 2015 |
