| DockQ: A Quality Measure for Protein-Protein Docking Models S Basu, B Wallner PLOS ONE 11 (8), e0161879, 2016 | 236 | 2016 |
| DelPhiPKa: Including salt in the calculations and enabling polar residues to titrate S Pahari, L Sun, S Basu, E Alexov Proteins: Structure, Function, and Bioinformatics 86 (12), 1277-1283, 2018 | 56 | 2018 |
| Finding correct protein–protein docking models using ProQDock S Basu, B Wallner Bioinformatics 32 (12), i262–i270, 2016 | 55 | 2016 |
| A comprehensive computational study of amino acid interactions in membrane proteins MN Mbaye, Q Hou, S Basu, F Teheux, F Pucci, M Rooman Scientific reports 9 (1), 12043, 2019 | 53 | 2019 |
| DelPhi suite: new developments and review of functionalities C Li, Z Jia, A Chakravorty, S Pahari, Y Peng, S Basu, M Koirala, ... Journal of computational chemistry 40 (28), 2502-2508, 2019 | 50 | 2019 |
| Inner-View of Nanomaterial Incited Protein Conformational Changes: Insights into Designable Interaction A Mukhopadhyay, S Basu, S Singha, HK Patra Research 2018, 9712832, 2018 | 47 | 2018 |
| Salt-bridge Networks within Globular and Disordered Proteins - Characterizing Trends for Designable Interactions S Basu, D Mukharjee Journal of Molecular Modeling 23, 206, 2017 | 35 | 2017 |
| Self-complementarity within proteins: bridging the gap between binding and folding S Basu, D Bhattacharyya, R Banerjee Biophysical Journal 102 (11), 2605-2614, 2012 | 34 | 2012 |
| Proteus: a random forest classifier to predict disorder-to-order transitioning binding regions in intrinsically disordered proteins S Basu, F Söderquist, B Wallner Journal of Computer-Aided Molecular Design 2017, 1-14, 2017 | 32 | 2017 |
| Mapping the distribution of packing topologies within protein interiors shows predominant preference for specific packing motifs S Basu, D Bhattacharyya, R Banerjee BMC bioinformatics 12, 1-26, 2011 | 26 | 2011 |
| Salt-bridge Dynamics in Intrinsically Disordered Proteins: A trade-off between electrostatic interactions and structural flexibility S Basu, P Biswas BBA Proteins and Proteomics 1866 (5-6), 624-641, 2018 | 25 | 2018 |
| Analysis of stacking overlap in nucleic acid structures: algorithm and application PK Pingali, S Halder, D Mukherjee, S Basu, R Banerjee, D Choudhury, ... Journal of computer-aided molecular design 28, 851-867, 2014 | 25 | 2014 |
| Applications of complementarity plot in error detection and structure validation of proteins S Basu, D Bhattacharyya, R Banerjee Indian Journal of Biochemistry and Biophysics 51 (3), 188-200, 2014 | 25 | 2014 |
| Structural perspective on revealing and altering molecular functions of genetic variants linked with diseases Y Peng, E Alexov, S Basu International journal of molecular sciences 20 (3), 548, 2019 | 20 | 2019 |
| Plausible blockers of Spike RBD in SARS-CoV2—Molecular design and underlying interaction dynamics from high-level structural descriptors S Basu, D Chakravarty, D Bhattacharyya, P Saha, HK Patra Journal of Molecular Modeling 27 (6), 191, 2021 | 16 | 2021 |
| Equilibrium unfolding of cyclophilin from Leishmania donovani: Characterization of intermediate states S Roy, S Basu, AK Datta, D Bhattacharyya, R Banerjee, D Dasgupta International journal of biological macromolecules 69, 353-360, 2014 | 14 | 2014 |
| Nitric oxide sensing by chlorophyll a A Bhattacharya, P Biswas, P Kar, P Roychoudhury, S Basu, S Ganguly, ... Analytica chimica acta 985, 101-113, 2017 | 12 | 2017 |
| Capturing a crucial 'disorder-to-order transition' at the heart of the coronavirus molecular pathology – triggered by highly persistent, interchangeable salt-bridges S Roy, P Ghosh, A Bandyapadhyay, S Basu Vaccines 10 (2), 301, 2022 | 10 | 2022 |
| RNAHelix: computational modeling of nucleic acid structures with Watson–Crick and non-canonical base pairs D Bhattacharyya, S Halder, S Basu, D Mukherjee, P Kumar, M Bansal Journal of Computer-Aided Molecular Design, 1-17, 2017 | 10 | 2017 |
| CPdock: the complementarity plot for docking of proteins: implementing multi-dielectric continuum electrostatics S Basu Journal of molecular modeling 24, 1-11, 2018 | 9 | 2018 |
Björn WallnerProfessorVerified email at liu.se
