Caleb Lareau
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Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types
HK Finucane, YA Reshef, V Anttila, K Slowikowski, A Gusev, A Byrnes, ...
Nature genetics 50 (4), 621-629, 2018
Integrated single-cell analysis maps the continuous regulatory landscape of human hematopoietic differentiation
JD Buenrostro, MR Corces, CA Lareau, B Wu, AN Schep, MJ Aryee, ...
Cell 173 (6), 1535-1548. e16, 2018
Transcriptome-wide off-target RNA editing induced by CRISPR-guided DNA base editors
J Grünewald, R Zhou, SP Garcia, S Iyer, CA Lareau, MJ Aryee, JK Joung
Nature 569 (7756), 433-437, 2019
Lineage tracing in humans enabled by mitochondrial mutations and single-cell genomics
LS Ludwig, CA Lareau, JC Ulirsch, E Christian, C Muus, LH Li, K Pelka, ...
Cell 176 (6), 1325-1339. e22, 2019
A non-canonical SWI/SNF complex is a synthetic lethal target in cancers driven by BAF complex perturbation
BC Michel, AR D’Avino, SH Cassel, N Mashtalir, ZM McKenzie, ...
Nature cell biology 20 (12), 1410-1420, 2018
The cis-regulatory atlas of the mouse immune system
H Yoshida, CA Lareau, RN Ramirez, SA Rose, B Maier, A Wroblewska, ...
Cell 176 (4), 897-912. e20, 2019
Droplet-based combinatorial indexing for massive-scale single-cell chromatin accessibility
CA Lareau, FM Duarte, JG Chew, VK Kartha, ZD Burkett, AS Kohlway, ...
Nature Biotechnology 37 (8), 916-924, 2019
Transcript-indexed ATAC-seq for precision immune profiling
AT Satpathy, N Saligrama, JD Buenrostro, Y Wei, B Wu, AJ Rubin, ...
Nature medicine 24 (5), 580-590, 2018
Dissecting hematopoietic and renal cell heterogeneity in adult zebrafish at single-cell resolution using RNA sequencing
Q Tang, S Iyer, R Lobbardi, JC Moore, H Chen, C Lareau, C Hebert, ...
Journal of Experimental Medicine 214 (10), 2875-2887, 2017
CRISPR DNA base editors with reduced RNA off-target and self-editing activities
J Grünewald, R Zhou, S Iyer, CA Lareau, SP Garcia, MJ Aryee, JK Joung
Nature biotechnology 37 (9), 1041-1048, 2019
Response to “Unexpected mutations after CRISPR–Cas9 editing in vivo
CA Lareau, K Clement, JY Hsu, V Pattanayak, JK Joung, MJ Aryee, ...
Nature methods 15 (4), 238, 2018
Activity-by-contact model of enhancer–promoter regulation from thousands of CRISPR perturbations
CP Fulco, J Nasser, TR Jones, G Munson, DT Bergman, V Subramanian, ...
Nature genetics 51 (12), 1664-1669, 2019
Interrogation of human hematopoiesis at single-cell and single-variant resolution
JC Ulirsch, CA Lareau, EL Bao, LS Ludwig, MH Guo, C Benner, ...
Nature genetics 51 (4), 683-693, 2019
Single-cell trajectories reconstruction, exploration and mapping of omics data with STREAM
H Chen, L Albergante, JY Hsu, CA Lareau, GL Bosco, J Guan, S Zhou, ...
Nature communications 10 (1), 1-14, 2019
hichipper: a preprocessing pipeline for calling DNA loops from HiChIP data
CA Lareau, MJ Aryee
Nature methods 15 (3), 155-156, 2018
AB cell regulome links notch to downstream oncogenic pathways in small B cell lymphomas
RJH Ryan, J Petrovic, DM Rausch, Y Zhou, CA Lareau, MJ Kluk, ...
Cell reports 21 (3), 784-797, 2017
Encore: genetic association interaction network centrality pipeline and application to SLE exome data
NA Davis, CA Lareau, BC White, A Pandey, G Wiley, CG Montgomery, ...
Genetic epidemiology 37 (6), 614-621, 2013
Differential co-expression network centrality and machine learning feature selection for identifying susceptibility hubs in networks with scale-free structure
CA Lareau, BC White, AL Oberg, BA McKinney
BioData mining 8 (1), 5, 2015
Enhancer histone-QTLs are enriched on autoimmune risk haplotypes and influence gene expression within chromatin networks
RC Pelikan, JA Kelly, Y Fu, CA Lareau, KL Tessneer, GB Wiley, MM Wiley, ...
Nature communications 9 (1), 1-14, 2018
Transcriptional states and chromatin accessibility underlying human erythropoiesis
LS Ludwig, CA Lareau, EL Bao, SK Nandakumar, C Muus, JC Ulirsch, ...
Cell reports 27 (11), 3228-3240. e7, 2019
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Articles 1–20