The Perseus computational platform for comprehensive analysis of (prote) omics data S Tyanova, T Temu, P Sinitcyn, A Carlson, MY Hein, T Geiger, M Mann, ... Nature methods 13 (9), 731, 2016 | 1441 | 2016 |
Direct identification of clinically relevant neoepitopes presented on native human melanoma tissue by mass spectrometry M Bassani-Sternberg, E Bräunlein, R Klar, T Engleitner, P Sinitcyn, ... Nature communications 7, 13404, 2016 | 208 | 2016 |
Visualization of LC‐MS/MS proteomics data in MaxQuant S Tyanova, T Temu, A Carlson, P Sinitcyn, M Mann, J Cox Proteomics 15 (8), 1453-1456, 2015 | 111 | 2015 |
Ultra-deep and quantitative saliva proteome reveals dynamics of the oral microbiome N Grassl, NA Kulak, G Pichler, PE Geyer, J Jung, S Schubert, P Sinitcyn, ... Genome medicine 8 (1), 44, 2016 | 78 | 2016 |
Computational methods for understanding mass spectrometry–based shotgun proteomics data P Sinitcyn, JD Rudolph, J Cox Annual Review of Biomedical Data Science 1, 207-234, 2018 | 35 | 2018 |
The ER membrane protein complex interacts cotranslationally to enable biogenesis of multipass membrane proteins MJ Shurtleff, DN Itzhak, JA Hussmann, NTS Oakdale, EA Costa, ... Elife 7, e37018, 2018 | 34 | 2018 |
MaxQuant goes Linux P Sinitcyn, S Tiwary, J Rudolph, P Gutenbrunner, C Wichmann, Ş Yılmaz, ... Nature methods 15 (6), 401, 2018 | 7 | 2018 |
Translatome and transcriptome analysis of TMA20 (MCT-1) and TMA64 (eIF2D) knockout yeast strains DS Makeeva, AS Lando, A Anisimova, AA Egorov, MD Logacheva, ... Data in brief 23, 103701, 2019 | 2 | 2019 |
A novel uORF-based regulatory mechanism controls translation of the human MDM2 and eIF2D mRNAs during stress KA Akulich, PG Sinitcyn, DS Makeeva, DE Andreev, IM Terenin, ... Biochimie 157, 92-101, 2019 | | 2019 |
Spatial and temporal monitoring of neoantigen-specific T cells and T-cell receptors in a melanoma patient with secondary immune resistance to Ipilimumab E Braeunlein, G Lupoli, M Pecoraro, T Engleitner, A Stelzl, M Boxberg, ... Karger, 2018 | | 2018 |
Peptidyl transferase inhibitors arrest the ribosome at specific amino acid codons: insights from an integrated approach K Akulich, P Sinitcyn, I Lomakin, D Andreev, I Terenin, V Smirnova, ... FEBS JOURNAL 284, 296-296, 2017 | | 2017 |