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Francesca Di Giallonardo
Francesca Di Giallonardo
Postdoctoral Research Fellow, University of New South Wales
Verified email at kirby.unsw.edu.au - Homepage
Title
Cited by
Cited by
Year
Full-length haplotype reconstruction to infer the structure of heterogeneous virus populations
FD Giallonardo, A Töpfer, M Rey, S Prabhakaran, Y Duport, C Leemann, ...
Nucleic acids research 42 (14), e115-e115, 2014
1292014
Low-frequency drug-resistant HIV-1 and risk of virological failure to first-line NNRTI-based ART: a multicohort European case–control study using centralized ultrasensitive 454 …
A Cozzi-Lepri, M Noguera-Julian, F Di Giallonardo, R Schuurman, ...
Journal of antimicrobial chemotherapy 70 (3), 930-940, 2015
1212015
Virological factors that increase the transmissibility of emerging human viruses
JL Geoghegan, AM Senior, F Di Giallonardo, EC Holmes
Proceedings of the National Academy of Sciences 113 (15), 4170-4175, 2016
1072016
RNA-Seq analysis of chikungunya virus infection and identification of granzyme A as a major promoter of arthritic inflammation
JAC Wilson, NA Prow, WA Schroder, JJ Ellis, HE Cumming, LJ Gearing, ...
PLoS pathogens 13 (2), e1006155, 2017
832017
Dinucleotide composition in animal RNA viruses is shaped more by virus family than by host species
F Di Giallonardo, TE Schlub, M Shi, EC Holmes
Journal of virology 91 (8), e02381-16, 2017
782017
Next-generation sequencing of HIV-1 RNA genomes: determination of error rates and minimizing artificial recombination
F Di Giallonardo, O Zagordi, Y Duport, C Leemann, B Joos, ...
PloS one 8 (9), e74249, 2013
672013
EH3 (ABHD9): the first member of a new epoxide hydrolase family with high activity for fatty acid epoxides
M Decker, M Adamska, A Cronin, F Di Giallonardo, J Burgener, ...
Journal of lipid research 53 (10), 2038-2045, 2012
672012
Distinct viral lineages from fish and amphibians reveal the complex evolutionary history of hepadnaviruses
JA Dill, AC Camus, JH Leary, F Di Giallonardo, EC Holmes, TFF Ng
Journal of virology 90 (17), 7920-7933, 2016
642016
Viral biocontrol: grand experiments in disease emergence and evolution
F Di Giallonardo, EC Holmes
Trends in microbiology 23 (2), 83-90, 2015
502015
Tailored enrichment strategy detects low abundant small noncoding RNAs in HIV-1 infected cells
CF Althaus, V Vongrad, B Niederöst, B Joos, F Di Giallonardo, P Rieder, ...
Retrovirology 9 (1), 1-13, 2012
442012
Fluid spatial dynamics of West Nile virus in the United States: Rapid spread in a permissive host environment
F Di Giallonardo, JL Geoghegan, DE Docherty, RG McLean, MC Zody, ...
Journal of virology 90 (2), 862-872, 2016
432016
Hidden diversity and evolution of viruses in market fish
JL Geoghegan, F Di Giallonardo, K Cousins, M Shi, JE Williamson, ...
Virus Evolution 4 (2), vey031, 2018
372018
A framework for inferring fitness landscapes of patient-derived viruses using quasispecies theory
D Seifert, F Di Giallonardo, KJ Metzner, HF Günthard, N Beerenwinkel
Genetics 199 (1), 191-203, 2015
342015
An international multicenter study on HIV-1 drug resistance testing by 454 ultra-deep pyrosequencing
BB Simen, MS Braverman, I Abbate, J Aerssens, Y Bidet, O Bouchez, ...
Journal of virological methods 204, 31-37, 2014
342014
A comprehensive analysis of primer IDs to study heterogeneous HIV-1 populations
D Seifert, F Di Giallonardo, A Töpfer, J Singer, S Schmutz, HF Günthard, ...
Journal of molecular biology 428 (1), 238-250, 2016
332016
Genomic epidemiology of the first wave of SARS-CoV-2 in Italy
F Di Giallonardo, S Duchene, I Puglia, V Curini, F Profeta, C Cammà, ...
Viruses 12 (12), 1438, 2020
312020
Contribution of APOBEC3G/F activity to the development of low-abundance drug-resistant human immunodeficiency virus type 1 variants
M Noguera-Julian, A Cozzi-Lepri, F Di Giallonardo, R Schuurman, ...
Clinical microbiology and infection 22 (2), 191-200, 2016
282016
Emergence and spread of SARS-CoV-2 lineages B. 1.1. 7 and P. 1 in Italy
F Di Giallonardo, I Puglia, V Curini, C Cammà, I Mangone, P Calistri, ...
Viruses 13 (5), 794, 2021
272021
Substitution model adequacy and assessing the reliability of estimates of virus evolutionary rates and time scales
S Duchêne, F Di Giallonardo, EC Holmes
Molecular biology and evolution 33 (1), 255-267, 2016
262016
Monocyte-derived macrophages exhibit distinct and more restricted HIV-1 integration site repertoire than CD4+ T cells
YL Kok, V Vongrad, M Shilaih, F Di Giallonardo, H Kuster, R Kouyos, ...
Scientific reports 6 (1), 1-11, 2016
252016
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