| Whole genome assembly of a natto production strain Bacillus subtilis natto from very short read data Y Nishito, Y Osana, T Hachiya, K Popendorf, A Toyoda, A Fujiyama, ... BMC genomics 11, 1-12, 2010 | 126 | 2010 |
| Whole-Genome Tiling Array Analysis of Mycobacterium leprae RNA Reveals High Expression of Pseudogenes and Noncoding Regions T Akama, K Suzuki, K Tanigawa, A Kawashima, H Wu, N Nakata, Y Osana, ... Journal of bacteriology 191 (10), 3321-3327, 2009 | 81 | 2009 |
| Accurate identification of orthologous segments among multiple genomes T Hachiya, Y Osana, K Popendorf, Y Sakakibara Bioinformatics 25 (7), 853-860, 2009 | 48 | 2009 |
| Comparison of the terrestrial cyanobacterium Leptolyngbya sp. NIES-2104 and the freshwater Leptolyngbya boryana PCC 6306 genomes Y Shimura, Y Hirose, N Misawa, Y Osana, H Katoh, H Yamaguchi, ... DNA Research 22 (6), 403-412, 2015 | 45 | 2015 |
| Stochastic simulation for biochemical reactions on FPGA M Yoshimi, Y Osana, T Fukushima, H Amano Field Programmable Logic and Application: 14th International Conference, FPL …, 2004 | 44 | 2004 |
| Hardware-resource Utilization Analysis on an FPGA-Based Biochemical Simulator ReCSiP Y Osana, N Iwanaga, M Yoshimi, Y Iwaoka, T Kojima, Y Nishikawa, ... IEICE Technical Report; IEICE Tech. Rep. 105 (518), 59-64, 2006 | 41 | 2006 |
| Murasaki: a fast, parallelizable algorithm to find anchors from multiple genomes K Popendorf, H Tsuyoshi, Y Osana, Y Sakakibara PloS one 5 (9), e12651, 2010 | 40 | 2010 |
| FPGA implementation of a data-driven stochastic biochemical simulator with the next reaction method M Yoshimi, Y Iwaoka, Y Nishikawa, T Kojima, Y Osana, A Funahashi, ... 2007 International Conference on Field Programmable Logic and Applications …, 2007 | 27 | 2007 |
| Complete genome sequence of Microcystis aeruginosa NIES-2549, a bloom-forming cyanobacterium from Lake Kasumigaura, Japan H Yamaguchi, S Suzuki, Y Tanabe, Y Osana, Y Shimura, K Ishida, ... Genome Announcements 3 (3), 10.1128/genomea. 00551-15, 2015 | 22 | 2015 |
| Exploiting memory hierarchy for a computational fluid dynamics accelerator on FPGAs H Morishita, Y Osana, N Fujita, H Amano 2008 International Conference on Field-Programmable Technology, 193-200, 2008 | 19 | 2008 |
| Implementation and evaluation of an arithmetic pipeline on FLOPS-2D: multi-FPGA system H Morisita, K Inakagata, Y Osana, N Fujita, H Amano ACM SIGARCH Computer Architecture News 38 (4), 8-13, 2011 | 18 | 2011 |
| Efficient scheduling of rate law functions for ODE-based multimodel biochemical simulation on an FPGA N Iwanaga, Y Shibata, M Yoshimi, Y Osana, Y Iwaoka, T Fukushima, ... International Conference on Field Programmable Logic and Applications, 2005 …, 2005 | 17 | 2005 |
| An FPGA implementation of high throughput stochastic simulator for large-scale biochemical systems M Yoshimi, Y Osana, Y Iwaoka, Y Nishikawa, T Kojima, A Funahashi, ... 2006 International Conference on Field Programmable Logic and Applications, 1-6, 2006 | 15 | 2006 |
| An FPGA-based acceleration method for metabolic simulation Y Osana, T Fukushima, M Yoshimi, H Amano IEICE TRANSACTIONS on Information and Systems 87 (8), 2029-2037, 2004 | 15 | 2004 |
| Reconfigurable out-of-order mechanism generator for unstructured grid computation in computational fluid dynamics T Akamine, K Inakagata, Y Osana, N Fujita, H Amano 22nd International Conference on Field Programmable Logic and Applications …, 2012 | 13 | 2012 |
| ReCSiP: a reconfigurable cell simulation platform: accelerating biological applications with FPGA Y Osana, T Fukushima, H Amano ASP-DAC 2004: Asia and South Pacific Design Automation Conference 2004 (IEEE …, 2004 | 13 | 2004 |
| Implementation of recsip: a reconfigurable cell simulation platform Y Osana, T Fukushima, H Amano Field Programmable Logic and Application: 13th International Conference, FPL …, 2003 | 13 | 2003 |
| Genomic characteristics of the toxic bloom-forming cyanobacterium Microcystis aeruginosa NIES-102 H Yamaguchi, S Suzuki, Y Osana, M Kawachi Journal of Genomics 8, 1, 2020 | 12 | 2020 |
| Complete genome sequence of Microcystis aeruginosa NIES-2481 and common genomic features of group G M. aeruginosa H Yamaguchi, S Suzuki, Y Osana, M Kawachi Journal of Genomics 6, 30, 2018 | 11 | 2018 |
| ReCSiP: An FPGA‐based general‐purpose biochemical simulator Y Osana, M Yoshimi, Y Iwaoka, T Kojima, Y Nishikawa, A Funahashi, ... Electronics and Communications in Japan (Part II: Electronics) 90 (7), 1-10, 2007 | 11 | 2007 |
