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Vanessa Sochat
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Singularity: Scientific containers for mobility of compute
GM Kurtzer, V Sochat, MW Bauer
PloS one 12 (5), e0177459, 2017
10702017
The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments
KJ Gorgolewski, T Auer, VD Calhoun, RC Craddock, S Das, EP Duff, ...
Scientific data 3 (1), 1-9, 2016
9452016
NeuroVault. org: a web-based repository for collecting and sharing unthresholded statistical maps of the human brain
KJ Gorgolewski, G Varoquaux, G Rivera, Y Schwarz, SS Ghosh, ...
Frontiers in neuroinformatics 9, 8, 2015
5232015
Sustainable data analysis with Snakemake
F Mölder, KP Jablonski, B Letcher, MB Hall, CH Tomkins-Tinch, V Sochat, ...
F1000Research 10, 2021
3642021
Long-term neural and physiological phenotyping of a single human
RA Poldrack, TO Laumann, O Koyejo, B Gregory, A Hover, MY Chen, ...
Nature communications 6 (1), 8885, 2015
3632015
Searching for a minimal set of behaviors for autism detection through feature selection-based machine learning
JA Kosmicki, V Sochat, M Duda, DP Wall
Translational psychiatry 5 (2), e514-e514, 2015
1982015
NeuroVault. org: A repository for sharing unthresholded statistical maps, parcellations, and atlases of the human brain
KJ Gorgolewski, G Varoquaux, G Rivera, Y Schwartz, VV Sochat, ...
Neuroimage 124, 1242-1244, 2016
782016
The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Sci. Data 3, 160044
KJ Gorgolewski, T Auer, VD Calhoun, RC Craddock, S Das, EP Duff, ...
612016
Power and sample size calculations for fMRI studies based on the prevalence of active peaks
J Durnez, J Degryse, B Moerkerke, R Seurinck, V Sochat, RA Poldrack, ...
BioRxiv, 049429, 2016
532016
Sharing brain mapping statistical results with the neuroimaging data model
C Maumet, T Auer, A Bowring, G Chen, S Das, G Flandin, S Ghosh, ...
Scientific data 3 (1), 1-15, 2016
522016
The experiment factory: Standardizing behavioral experiments
VV Sochat, IW Eisenberg, AZ Enkavi, J Li, PG Bissett, RA Poldrack
Frontiers in psychology 7, 610, 2016
482016
Enhancing reproducibility in scientific computing: Metrics and registry for Singularity containers
VV Sochat, CJ Prybol, GM Kurtzer
PloS one 12 (11), e0188511, 2017
462017
Ten simple rules for writing Dockerfiles for reproducible data science
D Nüst, V Sochat, B Marwick, SJ Eglen, T Head, T Hirst, BD Evans
PLoS computational biology 16 (11), e1008316, 2020
452020
DataLad: distributed system for joint management of code, data, and their relationship
Y Halchenko, K Meyer, B Poldrack, D Solanky, A Wagner, J Gors, ...
Journal of Open Source Software 6 (63), 2021
402021
A robust classifier to distinguish noise from fMRI independent components
V Sochat, K Supekar, J Bustillo, V Calhoun, JA Turner, DL Rubin
PLoS One 9 (4), e95493, 2014
292014
The experiment factory: Reproducible experiment containers
V Sochat
Journal of Open Source Software 3 (22), 521, 2018
182018
Power and sample size calculations for fMRI studies based on the prevalence of active peaks. bioRxiv, 049429
J Durnez, J Degryse, B Moerkerke, R Seurinck, V Sochat, R Poldrack, ...
182016
Containershare: Open Source Registry to build, test, deploy with CircleCI
V Sochat
Journal of Open Source Software 3 (28), 878, 2018
112018
Singularity registry: open source registry for singularity images
V Sochat
Journal of Open Source Software 2 (18), 426, 2017
82017
Predicting prostate cancer recurrence after radical prostatectomy
A Jeffers, V Sochat, MW Kattan, C Yu, E Melcon, K Yamoah, TR Rebbeck, ...
The Prostate 77 (3), 291-298, 2017
62017
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