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Gayatri Kumar
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NrichD database: sequence databases enriched with computationally designed protein-like sequences aid in remote homology detection
R Mudgal, S Sandhya, G Kumar, R Sowdhamini, NR Chandra, ...
Nucleic acids research 43 (D1), D300-D305, 2015
132015
Protein sequence design and its applications
S Sandhya, R Mudgal, G Kumar, R Sowdhamini, N Srinivasan
Current opinion in structural biology 37, 71-80, 2016
122016
Fold combinations in multi-domain proteins
N Naveenkumar, G Kumar, R Sowdhamini, N Srinivasan, S Vishwanath
Bioinformation 15 (5), 342, 2019
62019
Use of designed sequences in protein structure recognition
G Kumar, R Mudgal, N Srinivasan, S Sandhya
Biology Direct 13, 1-13, 2018
52018
Patterns of oncogene coexpression at single-cell resolution influence survival in lymphoma
MM Hoppe, P Jaynes, F Shuangyi, Y Peng, S Sridhar, PM Hoang, CX Liu, ...
Cancer discovery 13 (5), 1144-1163, 2023
22023
Gibbs process distinguishes survival and reveals contact-inhibition genes in Glioblastoma multiforme
KK Afrooz Jahedi , Gayatri Kumar , Lavanya Kannan, Tarjani Agarwal, Jason ...
Plos One, 2023
22023
Artificial protein sequences enable recognition of vicinal and distant protein functional relationships
G Kumar, N Srinivasan, S Sandhya
Proteins: Structure, Function, and Bioinformatics 88 (12), 1688-1700, 2020
22020
Profiles of Natural and Designed Protein-Like Sequences Effectively Bridge Protein Sequence Gaps: Implications in Distant Homology Detection
G Kumar, N Srinivasan, S Sandhya
Data Mining Techniques for the Life Sciences, 149-167, 2022
12022
Enhancing Stock Price Predictions Through LSTM-based Recurrent Neural Networks
GVK Kumar, B Natarajan, K Venkatraman, SG Devi, P Selvam, ...
2024 International Conference on Integrated Circuits and Communication …, 2024
2024
Multi-omics analysis reveals immune features associated with immunotherapy benefit in squamous cell lung cancer patients from Phase III Lung-MAP S1400I trial.
ER Parra, J Zhang, DY Duose, E Gonzalez-Kozlova, MW Redman, ...
Clinical Cancer Research: an Official Journal of the American Association …, 2024
2024
Spatial modelling of the tumor microenvironment from multiplex immunofluorescence images: methods and applications
G Kumar, RK Pandurengan, ER Parra, K Kannan, C Haymaker
Frontiers in Immunology 14, 1288802, 2023
2023
Patterns of oncogene co-expression at single cell resolution influence survival in diffuse large B-cell lymphoma
MM Hoppe, P Jaynes, S Fan, Y Peng, S Sridhar, PM Hoang, X Liu, ...
Cancer Research 83 (7_Supplement), 5557-5557, 2023
2023
Dynamic Methylome Modification is Associated with Mutational Signatures in Aging and the Etiology of Disease
K Krishnasamy, N Pasha, G Kumar, N Nagarajan, B Mam, M Kishinani, ...
Archives of Clinical and Medical Case Reports 6 (2), 243-270, 2022
2022
Spatial Context of Tumor Immune Microenvironment of Matched Primary and Recurrent Glioblastomas
S Patel, P Gupta, A Jahedi, G Kumar, C Calderon, K Kannan, K Bhat
2022
Use of strategically designed protein-like sequences in structure and function recognition
G Kumar
2021
Dynamic methylome modification is associated with mutational signatures in aging and the etiology of disease
G Kumar, K Krishnasamy, N Pasha, N Nagarajan, B Mam, M Kishinani, ...
bioRxiv, 2020.12. 22.423778, 2020
2020
Patterns of oncogene co-expression at single cell resolution in cancer influence survival
MM Hoppe, P Jaynes, F Shuangyi, Y Peng, PM Hoang, L Xin, S De Mel, ...
medRxiv, 2020.10. 20.20216101, 2020
2020
161 Bridging the islands of protein families in sequence space using artificial sequences
N Srinivasan, R Mudgal, G Kumar, NR Chandra, R Sowdhamini, ...
Journal of Biomolecular Structure and Dynamics 33 (sup1), 103-104, 2015
2015
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