Abdollah 'Iman' Dehzangi
Abdollah 'Iman' Dehzangi
Assistant Professor at the Department of Computer Science, Rutgers University
Bestätigte E-Mail-Adresse bei rutgers.edu
Titel
Zitiert von
Zitiert von
Jahr
Improving prediction of secondary structure, local backbone angles and solvent accessible surface area of proteins by iterative deep learning
R Heffernan, K Paliwal, J Lyons, A Dehzangi, A Sharma, J Wang, A Sattar, ...
Scientific reports 5 (1), 1-11, 2015
3052015
Gram-positive and Gram-negative protein subcellular localization by incorporating evolutionary-based descriptors into Chou׳ s general PseAAC
A Dehzangi, R Heffernan, A Sharma, J Lyons, K Paliwal, A Sattar
Journal of theoretical biology 364, 284-294, 2015
2432015
A feature extraction technique using bi-gram probabilities of position specific scoring matrix for protein fold recognition
A Sharma, J Lyons, A Dehzangi, KK Paliwal
Journal of theoretical biology 320, 41-46, 2013
1462013
Predicting backbone Cα angles and dihedrals from protein sequences by stacked sparse auto‐encoder deep neural network
J Lyons, A Dehzangi, R Heffernan, A Sharma, K Paliwal, A Sattar, Y Zhou, ...
Journal of computational chemistry 35 (28), 2040-2046, 2014
1392014
Spider2: A package to predict secondary structure, accessible surface area, and main-chain torsional angles by deep neural networks
Y Yang, R Heffernan, K Paliwal, J Lyons, A Dehzangi, A Sharma, J Wang, ...
Prediction of protein secondary structure, 55-63, 2017
1252017
Highly accurate sequence-based prediction of half-sphere exposures of amino acid residues in proteins
R Heffernan, A Dehzangi, J Lyons, K Paliwal, A Sharma, J Wang, A Sattar, ...
Bioinformatics 32 (6), 843-849, 2016
862016
Predict gram-positive and gram-negative subcellular localization via incorporating evolutionary information and physicochemical features into Chou's general PseAAC
R Sharma, A Dehzangi, J Lyons, K Paliwal, T Tsunoda, A Sharma
IEEE transactions on nanobioscience 14 (8), 915-926, 2015
822015
A tri-gram based feature extraction technique using linear probabilities of position specific scoring matrix for protein fold recognition
KK Paliwal, A Sharma, J Lyons, A Dehzangi
IEEE transactions on nanobioscience 13 (1), 44-50, 2014
722014
iDTI-ESBoost: identification of drug target interaction using evolutionary and structural features with boosting
F Rayhan, S Ahmed, S Shatabda, DM Farid, Z Mousavian, A Dehzangi, ...
Scientific reports 7 (1), 1-18, 2017
672017
Using random forest for protein fold prediction problem: an empirical study.
A Dehzangi, S Phon-Amnuaisuk, O Dehzangi
J. Inf. Sci. Eng. 26 (6), 1941-1956, 2010
612010
A combination of feature extraction methods with an ensemble of different classifiers for protein structural class prediction problem
A Dehzangi, K Paliwal, A Sharma, O Dehzangi, A Sattar
IEEE/ACM Transactions on Computational Biology and Bioinformatics 10 (3 …, 2013
602013
A strategy to select suitable physicochemical attributes of amino acids for protein fold recognition
A Sharma, KK Paliwal, A Dehzangi, J Lyons, S Imoto, S Miyano
BMC bioinformatics 14 (1), 1-11, 2013
562013
PSSM-Suc: Accurately predicting succinylation using position specific scoring matrix into bigram for feature extraction
A Dehzangi, Y López, SP Lal, G Taherzadeh, J Michaelson, A Sattar, ...
Journal of theoretical biology 425, 97-102, 2017
512017
SucStruct: prediction of succinylated lysine residues by using structural properties of amino acids
Y López, A Dehzangi, SP Lal, G Taherzadeh, J Michaelson, A Sattar, ...
Analytical biochemistry 527, 24-32, 2017
512017
iDNAProt-ES: Identification of DNA-binding proteins using evolutionary and structural features
SY Chowdhury, S Shatabda, A Dehzangi
Scientific reports 7 (1), 1-14, 2017
502017
PyFeat: a Python-based effective feature generation tool for DNA, RNA and protein sequences
R Muhammod, S Ahmed, D Md Farid, S Shatabda, A Sharma, A Dehzangi
Bioinformatics 35 (19), 3831-3833, 2019
462019
A Segmentation-based Method to Extract Structural and Evolutionary Features for Protein Fold Recognition
A Dehzangi, J Lyons, A Sharma, A Sattar
IEEE/ACM Transactions on Computational Biology and Bioinformatics 11 (3 …, 2014
442014
Proposing a highly accurate protein structural class predictor using segmentation-based features
A Dehzangi, K Paliwal, J Lyons, A Sharma, A Sattar
BMC genomics 15 (1), 1-13, 2014
432014
Success: evolutionary and structural properties of amino acids prove effective for succinylation site prediction
Y López, A Sharma, A Dehzangi, SP Lal, G Taherzadeh, A Sattar, ...
BMC Genomics 19 (Suppl 1), 923, 2018
412018
Improving succinylation prediction accuracy by incorporating the secondary structure via helix, strand and coil, and evolutionary information from profile bigrams
A Dehzangi, Y López, SP Lal, G Taherzadeh, A Sattar, T Tsunoda, ...
PloS one 13 (2), e0191900, 2018
362018
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