Michaela M Salcher

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Thomas PoschLimnological Station, University of ZurichVerified email at limnol.uzh.ch
Jakob PernthalerProfessor, University of ZurichVerified email at limnol.uzh.ch
Rohit GhaiBiology Centre of the ASCR, Institute of Hydrobiology, České Budějovice, Czech RepublicVerified email at hbu.cas.cz
Maliheh MehrshadSwedish University of Agricultural SciencesVerified email at slu.se
Tanja ShabarovaBiology Centre of the AS CR, v.v.i. Institute of Hydrobiology Na Sádkách 7 370 05 České BudějoviceVerified email at hbu.cas.cz
Petr ZnachorBiology centre AS CR, v.v.i., Institute of HydrobiologyVerified email at hbu.cas.cz
Vinicius S. KavaguttiCEA/GenoscopeVerified email at genoscope.cns.fr
Shin-ichi NakanoCenter for Ecological Research, Kyoto UniversityVerified email at ecology.kyoto-u.ac.jp
Vesna GrujcicResearcher at SLU, UppsalaVerified email at slu.se
Paul-Adrian BulzuBiology Centre of the ASCR, Institute of Hydrobiology, České Budějovice, Czech RepublicVerified email at hbu.cas.cz
Indranil MukherjeeBiology Centre, Czech Academy of Sciences, Institute of Hydrobiology, Czech RepublicVerified email at hbu.cas.cz
Cecilia ChiriacInstitute of Hydrobiology, Biology Centre CASVerified email at hbu.cas.cz
Adrian-Stefan AndreiGroup Leader, Department of Plant and Microbial Biology, University of ZurichVerified email at limnol.uzh.ch
Markus HaberInstitute of Hydrobiology, Biology Centre CASVerified email at hbu.cas.cz
Yusuke OkazakiKyoto UniversityVerified email at kuicr.kyoto-u.ac.jp
Ester M EckertWater Research Institute VerbaniaVerified email at cnr.it
Piwosz KasiaNational Marine Fisheries Research InstituteVerified email at mir.gdynia.pl
Roberto Bertoniassociated senior scientist, CNR, IRSA: Water Research Institute, VerbaniaVerified email at irsa.cnr.it
Gianluca CornoResearcher in microbial ecology, CNR Water Research Institute VerbaniaVerified email at cnr.it
Pedro J Cabello-YevesUniversity of WarwickVerified email at warwick.ac.uk

Michaela M Salcher

Institute of Hydrobiology, Biology Centre of the Czech Academy of Sciences

Verified email at hbu.cas.cz - Homepage

aquatic microbial ecology microbial genomics microbial evolution


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Harmful filamentous cyanobacteria favoured by reduced water turnover with lake warming T Posch, O Köster, MM Salcher, J Pernthaler Nature Climate Change 2 (11), 809-813, 2012	396	2012
Seasonal bloom dynamics and ecophysiology of the freshwater sister clade of SAR11 bacteria ‘that rule the waves’(LD12) MM Salcher, J Pernthaler, T Posch The ISME journal 5 (8), 1242-1252, 2011	198	2011
Microdiversification in genome-streamlined ubiquitous freshwater Actinobacteria SM Neuenschwander, R Ghai, J Pernthaler, MM Salcher The ISME Journal 12 (1), 185-198, 2018	193	2018
In situ substrate preferences of abundant bacterioplankton populations in a prealpine freshwater lake MM Salcher, T Posch, J Pernthaler The ISME journal 7 (5), 896-907, 2013	139	2013
The ecology of pelagic freshwater methylotrophs assessed by a high-resolution monitoring and isolation campaign MM Salcher, SM Neuenschwander, T Posch, J Pernthaler The ISME journal 9 (11), 2442-2453, 2015	121	2015
Casting light on Asgardarchaeota metabolism in a sunlit microoxic niche PA Bulzu, AŞ Andrei, MM Salcher, M Mehrshad, K Inoue, H Kandori, ... Nature microbiology 4 (7), 1129-1137, 2019	119	2019
Hidden in plain sight—highly abundant and diverse planktonic freshwater Chloroflexi M Mehrshad, MM Salcher, Y Okazaki, S Nakano, K Šimek, AS Andrei, ... Microbiome 6, 1-13, 2018	116	2018
Same same but different: ecological niche partitioning of planktonic freshwater prokaryotes MM Salcher Journal of Limnology 73 (s1), 74-87, 2014	106	2014
Rapid successions affect microbial N‐acetyl‐glucosamine uptake patterns during a lacustrine spring phytoplankton bloom EM Eckert, MM Salcher, T Posch, B Eugster, J Pernthaler Environmental Microbiology 14 (3), 794-806, 2012	103	2012
Spatio‐temporal niche separation of planktonic Betaproteobacteria in an oligo‐mesotrophic lake MM Salcher, J Pernthaler, M Zeder, R Psenner, T Posch Environmental Microbiology 10 (8), 2074-2086, 2008	99	2008
Evolution in action: habitat transition from sediment to the pelagial leads to genome streamlining in Methylophilaceae MM Salcher, D Schaefle, M Kaspar, SM Neuenschwander, R Ghai The ISME journal 13 (11), 2764-2777, 2019	89	2019
Spatiotemporal distribution and activity patterns of bacteria from three phylogenetic groups in an oligomesotrophic lake MM Salcher, J Pernthaler, T Posch Limnology and Oceanography 55 (2), 846-856, 2010	89	2010
Niche-directed evolution modulates genome architecture in freshwater Planctomycetes AŞ Andrei, MM Salcher, M Mehrshad, P Rychtecký, P Znachor, R Ghai The ISME journal 13 (4), 1056-1071, 2019	87	2019
Phage-centric ecological interactions in aquatic ecosystems revealed through ultra-deep metagenomics VS Kavagutti, AŞ Andrei, M Mehrshad, MM Salcher, R Ghai Microbiome 7, 1-15, 2019	84	2019
Cryptophyta as major bacterivores in freshwater summer plankton V Grujcic, JK Nuy, MM Salcher, T Shabarova, V Kasalicky, J Boenigk, ... The ISME journal 12 (7), 1668-1681, 2018	77	2018
Vertical and longitudinal distribution patterns of different bacterioplankton populations in a canyon‐shaped, deep prealpine lake MM Salcher, J Pernthaler, N Frater, T Posch Limnology and Oceanography 56 (6), 2027-2039, 2011	68	2011
Quantitative dominance of seasonally persistent filamentous cyanobacteria (Planktothrix rubescens) in the microbial assemblages of a temperate lake S Van den Wyngaert, MM Salcher, J Pernthaler, M Zeder, T Posch Limnology and Oceanography 56 (1), 97-109, 2011	65	2011
Recovery of freshwater microbial communities after extreme rain events is mediated by cyclic succession T Shabarova, MM Salcher, P Porcal, P Znachor, J Nedoma, HP Grossart, ... Nature Microbiology 6 (4), 479-488, 2021	62	2021
New image analysis tool to study biomass and morphotypes of three major bacterioplankton groups in an alpine lake T Posch, J Franzoi, M Prader, MM Salcher Aquatic Microbial Ecology 54 (2), 113-126, 2009	61	2009
Succession of bacterial grazing defense mechanisms against protistan predators in an experimental microbial community MM Salcher, J Pernthaler, R Psenner, T Posch Aquatic Microbial Ecology 38, 215–229, 2005	58	2005

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