Matthias Wolf
Matthias Wolf
Senior Lecturer, Department of Bioinformatics, University of Würzburg
Verified email at - Homepage
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5.8S-28S rRNA interaction and HMM-based ITS2 annotation
A Keller, T Schleicher, J Schultz, T Müller, T Dandekar, M Wolf
Gene 430 (1), 50-57, 2009
A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota
J Schultz, S Maisel, D Gerlach, T Müller, M Wolf
RNA 11 (4), 361-364, 2005
4SALE–a tool for synchronous RNA sequence and secondary structure alignment and editing
P Seibel, T Müller, T Dandekar, J Schultz, M Wolf
BMC Bioinformatics 7 (1), 498, 2006
Distinguishing species
T Müller, N Philippi, T Dandekar, J Schultz, M Wolf
RNA 13 (9), 1469-1472, 2007
Synchronous visual analysis and editing of RNA sequence and secondary structure alignments using 4SALE
PN Seibel, T Müller, T Dandekar, M Wolf
BMC Research Notes 1 (1), 91, 2008
The ITS2 Database III—sequences and structures for phylogeny
C Koetschan, F Förster, A Keller, T Schleicher, B Ruderisch, R Schwarz, ...
Nucleic Acids Research 38 (Suppl 1), D275-D279, 2010
Phylogenetic relationship of Chlorella and Parachlorella gen. nov.(Chlorophyta, Trebouxiophyceae)
L Krienitz, EH Hegewald, D Hepperle, VAR Huss, T Rohr, M Wolf
Phycologia 43 (5), 529-542, 2004
ITS2 database V: Twice as much
MJ Ankenbrand, A Keller, M Wolf, J Schultz, F Förster
Molecular Biology and Evolution 32 (11), 3030–3032, 2015
The internal transcribed spacer 2 database—a web server for (not only) low level phylogenetic analyses
J Schultz, T Müller, M Achtziger, PN Seibel, T Dandekar, M Wolf
Nucleic Acids Research 34 (Suppl 2), W704-W707, 2006
ITS2 sequence–structure analysis in phylogenetics: a how-to manual for molecular systematics
J Schultz, M Wolf
Molecular phylogenetics and evolution 52 (2), 520-523, 2009
Homology modeling revealed more than 20,000 rRNA internal transcribed spacer 2 (ITS2) secondary structures
M Wolf, M Achtziger, J Schultz, T Dandekar, T Müller
RNA 11 (11), 1616-1623, 2005
Secondary structure of the ITS1 transcript and its application in a reconstruction of the phylogeny of Boraginales
M Gottschling, HH Hilger, M Wolf, N Diane
Plant biology 3 (06), 629-636, 2001
Including RNA secondary structures improves accuracy and robustness in reconstruction of phylogenetic trees
A Keller, F Förster, T Müller, T Dandekar, J Schultz, M Wolf
Biology Direct 5, 1-12, 2010
The ITS2 Database II: homology modelling RNA structure for molecular systematics
C Selig, M Wolf, T Müller, T Dandekar, J Schultz
Nucleic Acids Research 36 (Suppl 1), D377-D380, 2008
ITS2 database IV: Interactive taxon sampling for internal transcribed spacer 2 based phylogenies.
C Koetschan, T Hackl, T Müller, M Wolf, F Förster, J Schultz
Molecular Phylogenetics and Evolution 63, 585-588, 2012
ProfDistS:(profile-) distance based phylogeny on sequence—structure alignments
M Wolf, B Ruderisch, T Dandekar, J Schultz, T Müller
Bioinformatics 24 (20), 2401-2402, 2008
Phylogeny of Firmicutes with special reference to Mycoplasma (Mollicutes) as inferred from phosphoglycerate kinase amino acid sequence data
M Wolf, T Müller, T Dandekar, JD Pollack
International Journal of Systematic and Evolutionary Microbiology 54 (3 …, 2004
New molecular data for tardigrade phylogeny, with the erection of Paramacrobiotus gen. nov.
R Guidetti, RO Schill, R Bertolani, T Dandekar, M Wolf
Journal of Zoological Systematics and Evolutionary Research 47 (4), 315-321, 2009
Compensatory base changes in ITS2 secondary structures correlate with the biological species concept despite intragenomic variability in ITS2 sequences - a proof of concept
M Wolf, S Chen, J Song, M Ankenbrand, T Müller
PLoS One 8 (6), e66726, 2013
Internal transcribed spacer 2 (nu ITS2 rRNA) sequence-structure phylogenetics: towards an automated reconstruction of the green algal tree of life
MA Buchheim, A Keller, C Koetschan, F Förster, B Merget, M Wolf
PloS one 6 (2), e16931, 2011
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