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Surendra Negi
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Strange nonchaotic attractors
A Prasad, SS Negi, R Ramaswamy
International Journal of bifurcation and Chaos 11 (02), 291-309, 2001
1892001
InterProSurf: a web server for predicting interacting sites on protein surfaces
SS Negi, CH Schein, N Oezguen, TD Power, W Braun
Bioinformatics 23 (24), 3397-3399, 2007
1822007
Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: a CASP‐CAPRI experiment
MF Lensink, S Velankar, A Kryshtafovych, SY Huang, ...
Proteins: Structure, Function, and Bioinformatics 84, 323-348, 2016
1662016
Automated detection of conformational epitopes using phage display peptide sequences
SS Negi, W Braun
Bioinformatics and biology insights 3, BBI. S2745, 2009
1072009
Conformational flexibility of mammalian cytochrome P450 2B4 in binding imidazole inhibitors with different ring chemistry and side chains: solution thermodynamics and molecular …
BK Muralidhara, S Negi, CC Chin, W Braun, JR Halpert
Journal of biological chemistry 281 (12), 8051-8061, 2006
892006
Comprehensive 3D-modeling of allergenic proteins and amino acid composition of potential conformational IgE epitopes
N Oezguen, B Zhou, SS Negi, O Ivanciuc, CH Schein, G Labesse, ...
Molecular immunology 45 (14), 3740-3747, 2008
782008
The importance of the 2S albumins for allergenicity and cross-reactivity of peanuts, tree nuts, and sesame seeds
SC Dreskin, SJ Koppelman, S Andorf, KC Nadeau, A Kalra, W Braun, ...
Journal of Allergy and Clinical Immunology 147 (4), 1154-1163, 2021
622021
Structural analysis of linear and conformational epitopes of allergens
O Ivanciuc, CH Schein, T Garcia, N Oezguen, SS Negi, W Braun
Regulatory toxicology and pharmacology 54 (3), S11-S19, 2009
572009
Statistical analysis of physical-chemical properties and prediction of protein-protein interfaces
SS Negi, W Braun
Journal of molecular modeling 13, 1157-1167, 2007
572007
Conformational IgE epitopes of peanut allergens Ara h 2 and Ara h 6
X Chen, SS Negi, S Liao, V Gao, W Braun, SC Dreskin
Clinical & Experimental Allergy 46 (8), 1120-1128, 2016
552016
Membrane fusion triggering: three modules with different structure and function in the upper half of the measles virus attachment protein stalk
CK Navaratnarajah, S Negi, W Braun, R Cattaneo
Journal of Biological Chemistry 287 (46), 38543-38551, 2012
512012
Cross-React: a new structural bioinformatics method for predicting allergen cross-reactivity
SS Negi, W Braun
Bioinformatics 33 (7), 1014-1020, 2017
492017
Base of the measles virus fusion trimer head receives the signal that triggers membrane fusion
S Apte-Sengupta, S Negi, VHJ Leonard, N Oezguen, CK Navaratnarajah, ...
Journal of Biological Chemistry 287 (39), 33026-33035, 2012
462012
Western equine encephalitis virus: evolutionary analysis of a declining alphavirus based on complete genome sequences
NA Bergren, AJ Auguste, NL Forrester, SS Negi, WA Braun, SC Weaver
Journal of virology 88 (16), 9260-9267, 2014
452014
Rational engineering of human cytochrome P450 2B6 for enhanced expression and stability: importance of a Leu264→ Phe substitution
S Kumar, Y Zhao, L Sun, SS Negi, JR Halpert, BK Muralidhara
Molecular pharmacology 72 (5), 1191-1199, 2007
392007
Bifurcations and transitions in the quasiperiodically driven logistic map
SS Negi, A Prasad, R Ramaswamy
Physica D: Nonlinear Phenomena 145 (1-2), 1-12, 2000
352000
Regional and temporal coordinated mutation patterns in SARS-CoV-2 spike protein revealed by a clustering and network analysis
SS Negi, CH Schein, W Braun
Scientific reports 12 (1), 1128, 2022
332022
Thermodynamics of phosphopeptide tethering to BRCT: the structural minima for inhibitor design
GL Lokesh, BK Muralidhara, SS Negi, A Natarajan
Journal of the American Chemical Society 129 (35), 10658-10659, 2007
322007
Determining functionally important amino acid residues of the E1 protein of Venezuelan equine encephalitis virus
SS Negi, AA Kolokoltsov, CH Schein, RA Davey, W Braun
Journal of molecular modeling 12, 921-929, 2006
292006
IgE binding to linear epitopes of Ara h 2 in peanut allergic preschool children undergoing oral Immunotherapy
SC Dreskin, M Germinaro, D Reinhold, X Chen, BP Vickery, M Kulis, ...
Pediatric Allergy and Immunology 30 (8), 817-823, 2019
282019
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