| Integrated genome browser: visual analytics platform for genomics NH Freese, DC Norris, AE Loraine Bioinformatics 32 (14), 2089-2095, 2016 | 196 | 2016 |
| Genome-wide association mapping and identification of candidate genes for the rumpless and ear-tufted traits of the Araucana chicken RE Noorai, NH Freese, LM Wright, SC Chapman, LA Clark PloS one 7 (7), e40974, 2012 | 24 | 2012 |
| A novel gain-of-function mutation of the proneural IRX1 and IRX2 genes disrupts axis elongation in the Araucana rumpless chicken NH Freese, BA Lam, M Staton, A Scott, SC Chapman PloS one 9 (11), e112364, 2014 | 11 | 2014 |
| ProtAnnot: an App for Integrated Genome Browser to display how alternative splicing and transcription affect proteins T Mall, J Eckstein, D Norris, H Vora, NH Freese, AE Loraine Bioinformatics 32 (16), 2499-2501, 2016 | 10 | 2016 |
| An ‘eFP‐Seq Browser’for visualizing and exploring RNA sequencing data A Sullivan, PK Purohit, NH Freese, A Pasha, E Esteban, J Waese, A Wu, ... The Plant Journal 100 (3), 641-654, 2019 | 9 | 2019 |
| Analysis of pollen-specific alternative splicing in Arabidopsis thaliana via semi-quantitative PCR AD Estrada, NH Freese, IC Blakley, AE Loraine PeerJ 3, e919, 2015 | 8 | 2015 |
| The Arabidopsis transcription factor AINTEGUMENTA orchestrates patterning genes and auxin signaling in the establishment of floral growth and form BA Krizek, IC Blakley, YY Ho, N Freese, AE Loraine The Plant Journal 103 (2), 752-768, 2020 | 4 | 2020 |
| Many rice genes are differentially spliced between roots and shoots but cytokinin has minimal effect on splicing NH Freese, AR Estrada, IC Blakley, J Duan, AE Loraine Plant direct 3 (5), e00136, 2019 | 1 | 2019 |
| Whole genome bisulfite sequencing of Medicago truncatula A17 wild type and lss mutants NH Freese, EL Schnabel, JA Frugoli BMC research notes 13, 1-3, 2020 | | 2020 |
| AINTEGUMENTA and AINTEGUMENTA-LIKE6 directly regulate floral homeotic and growth genes in young flowers BA Krizek, AT Bantle, JM Heflin, H Han, N Freese, AE Loraine bioRxiv, 2020 | | 2020 |
| BioViz Connect: Web application linking CyVerse science gateway resources to genomic visualization in the Integrated Genome Browser NH Freese, K Raveendran, C Kintali, S Tiwari, P Bole, AE Loraine bioRxiv, 2020 | | 2020 |
| BioViz Connect: Web application linking CyVerse cloud resources to genomic visualization in the Integrated Genome Browser K Raveendran, C Kintali, S Tiwari, P Bole, NH Freese, A Loraine bioRxiv, 2020 | | 2020 |
| Discovery of genomic variations by whole-genome resequencing of the North American Araucana chicken RE Noorai, V Shankar, NH Freese, CM Gregorski, SC Chapman PloS one 14 (12), e0225834, 2019 | | 2019 |
| ProtAnnot: visualizing effects of alternative splicing and transcription on protein sequence and function in a genome browser T Mall, J Eckstein, D Norris, H Vora, N Freese, AE Loraine bioRxiv, 025924, 2015 | | 2015 |
| A NOVEL GAIN OF FUNCTION OF THE IRX1 AND IRX2 GENES DISRUPTS AXIS ELONGATION IN THE ARAUCANA RUMPLESS CHICKEN N Freese | | 2013 |
| Premature downregulation of Tbx6 within the tailbud alters cell fates and leads to premature termination of axial elongation NH Freese, A Scott, S Chapman Developmental Biology 1 (356), 138, 2011 | | 2011 |
| Where'd my tail go? N Freese, SC Chapman Developmental Biology 1 (344), 441, 2010 | | 2010 |
| Salt Stress Affects DNA Methylation and Gene Expression Differently in Salt-Sensitive versus Salt-Tolerant Rice Cultivars Agami and M103 N Freese, A Loraine Plant and Animal Genome XXVI Conference (January 13-17, 2018), 0 | | |
