Genomic and phenotypic insights from an atlas of genetic effects on DNA methylation JL Min, G Hemani, E Hannon, KF Dekkers, J Castillo-Fernandez, R Luijk, ... Nature genetics 53 (9), 1311-1321, 2021 | 270 | 2021 |
sRNAtoolbox: an integrated collection of small RNA research tools A Rueda, G Barturen, R Lebrón, C Gómez-Martín, Á Alganza, JL Oliver, ... Nucleic acids research 43 (W1), W467-W473, 2015 | 230 | 2015 |
Integrative Analysis Reveals a Molecular Stratification of Systemic Autoimmune Diseases G Barturen, S Babaei, F Català-Moll, M Martínez-Bueno, Z Makowska, ... Arthritis & Rheumatology 73 (6), 1073-1085, 2021 | 127 | 2021 |
A new molecular classification to drive precision treatment strategies in primary Sjögren’s syndrome P Soret, C Le Dantec, E Desvaux, N Foulquier, B Chassagnol, S Hubert, ... Nature communications 12 (1), 3523, 2021 | 113 | 2021 |
Moving towards a molecular taxonomy of autoimmune rheumatic diseases G Barturen, L Beretta, R Cervera, R Van Vollenhoven, ... Nature Reviews Rheumatology 14 (2), 75-93, 2018 | 109 | 2018 |
sRNAbench: profiling of small RNAs and its sequence variants in single or multi-species high-throughput experiments G Barturen, A Rueda, M Hamberg, A Alganza, R Lebron, M Kotsyfakis, ... Methods in Next Generation Sequencing 1 (1), 21-31, 2014 | 101 | 2014 |
NGSmethDB: a database for next-generation sequencing single-cytosine-resolution DNA methylation data M Hackenberg, G Barturen, JL Oliver Nucleic acids research 39 (suppl_1), D75-D79, 2010 | 65 | 2010 |
Downregulation of exhausted cytotoxic T cells in gene expression networks of multisystem inflammatory syndrome in children ND Beckmann, PH Comella, E Cheng, L Lepow, AG Beckmann, SR Tyler, ... Nature communications 12 (1), 4854, 2021 | 63 | 2021 |
MethylExtract: high-quality methylation maps and SNV calling from whole genome bisulfite sequencing data G Barturen, A Rueda, JL Oliver, M Hackenberg F1000Research 2, 2013 | 63 | 2013 |
Prediction of CpG-island function: CpG clustering vs. sliding-window methods M Hackenberg, G Barturen, P Carpena, PL Luque-Escamilla, C Previti, ... BMC genomics 11, 1-14, 2010 | 63 | 2010 |
Genome-wide whole blood transcriptome profiling in a large European cohort of systemic sclerosis patients L Beretta, G Barturen, B Vigone, C Bellocchi, N Hunzelmann, ... Annals of the rheumatic diseases 79 (9), 1218-1226, 2020 | 38 | 2020 |
Epigenome-wide comparative study reveals key differences between mixed connective tissue disease and related systemic autoimmune diseases E Carnero-Montoro, G Barturen, E Povedano, M Kerick, ... Frontiers in Immunology 10, 1880, 2019 | 34 | 2019 |
Whole blood DNA methylation analysis reveals respiratory environmental traits involved in COVID-19 severity following SARS-CoV-2 infection G Barturen, E Carnero-Montoro, M Martínez-Bueno, S Rojo-Rello, ... Nature Communications 13 (1), 4597, 2022 | 29 | 2022 |
Clustering of DNA words and biological function: a proof of principle M Hackenberg, A Rueda, P Carpena, P Bernaola-Galván, G Barturen, ... Journal of theoretical biology 297, 127-136, 2012 | 26 | 2012 |
WordCluster: detecting clusters of DNA words and genomic elements M Hackenberg, P Carpena, P Bernaola-Galván, G Barturen, ÁM Alganza, ... Algorithms for Molecular Biology 6, 1-7, 2011 | 26 | 2011 |
Scoring personalized molecular portraits identify systemic lupus erythematosus subtypes and predict individualized drug responses, symptomatology and disease progression D Toro-Domínguez, J Martorell-Marugán, M Martinez-Bueno, ... Briefings in bioinformatics 23 (5), bbac332, 2022 | 25 | 2022 |
Integrative epigenomics in Sjögren´ s syndrome reveals novel pathways and a strong interaction between the HLA, autoantibodies and the interferon signature M Teruel, G Barturen, M Martínez-Bueno, O Castellini-Pérez, ... Scientific reports 11 (1), 23292, 2021 | 25 | 2021 |
NGSmethDB: an updated genome resource for high quality, single-cytosine resolution methylomes S Geisen, G Barturen, AM Alganza, M Hackenberg, JL Oliver Nucleic acids research 42 (D1), D53-D59, 2014 | 23 | 2014 |
High-level organization of isochores into gigantic superstructures in the human genome P Carpena, JL Oliver, M Hackenberg, AV Coronado, G Barturen, ... Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 83 (3 …, 2011 | 22 | 2011 |
A comprehensive database for integrated analysis of omics data in autoimmune diseases J Martorell-Marugán, R López-Domínguez, A García-Moreno, ... BMC bioinformatics 22 (1), 343, 2021 | 21 | 2021 |