Edward C Holmes - Google Scholar

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	All	Since 2015
Citations	78455	40944
h-index	140	93
i10-index	547	467

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Co-authors

Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk
Mang ShiSun Yat-sen UniversityVerified email at mail.sysu.edu.cn
Oliver PybusUniversity of Oxford / Royal Veterinary CollegeVerified email at zoo.ox.ac.uk
John-Sebastian EdenSenior Research Fellow; The Westmead Institute & University of SydneyVerified email at sydney.edu.au
Colin ParrishCornell UniversityVerified email at cornell.edu
Bryan GrenfellKathryn Briger and Sarah Fenton Professor of Ecology and Public Affairs, Princeton UniversityVerified email at princeton.edu
Sebastian DucheneAustralian Research Council DECRA fellow, University of MelbourneVerified email at unimelb.edu.au
Jemma L GeogheganUniversity of OtagoVerified email at otago.ac.nz
Tommy Tsan-Yuk LamThe University of Hong KongVerified email at hku.hk
Andrew KitchenAssociate Professor of Anthropology, University of IowaVerified email at uiowa.edu
Francesca Di GiallonardoPostdoctoral Research Fellow, University of New South WalesVerified email at kirby.unsw.edu.au
Jie CuiInstitut PasteurVerified email at ips.ac.cn
Siobain DuffyAssociate Professor, Dept Ecology, Evolution and Natural Resources, Rutgers UniversityVerified email at sebs.rutgers.edu
Cadhla FirthJames Cook UniversityVerified email at jcu.edu.au
Mathieu FourmentUniversity of Technology SydneyVerified email at uts.edu.au
Etienne Simon-LoriereInstitut PasteurVerified email at pasteur.fr
Michelle WilleSchool of Life and Environmental Science, University of SydneyVerified email at sydney.edu.au
Israel PaganCentro de Biotecnología y Genómica de Plantas (UPM-INIA)Verified email at upm.es
Maia RabaaOxford University Clinical Research Unit, HCMC, VietnamVerified email at oucru.org

Edward C Holmes

University of Sydney

Verified email at sydney.edu.au - Homepage

Evolutionary biology Virology


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Genomic characterisation and epidemiology of 2019 novel coronavirus: implications for virus origins and receptor binding R Lu, X Zhao, J Li, P Niu, B Yang, H Wu, W Wang, H Song, B Huang, ... The Lancet 395 (10224), 565-574, 2020	4261	2020
A new coronavirus associated with human respiratory disease in China F Wu, S Zhao, B Yu, YM Chen, W Wang, ZG Song, Y Hu, ZW Tao, JH Tian, ... Nature 579 (7798), 265-269, 2020	2924	2020
A metagenomic survey of microbes in honey bee colony collapse disorder DL Cox-Foster, S Conlan, EC Holmes, G Palacios, JD Evans, NA Moran, ... Science 318 (5848), 283-287, 2007	1809	2007
Classification of hepatitis C virus into six major genotypes and a series of subtypes by phylogenetic analysis of the NS-5 region P Simmonds, EC Holmes, TA Cha, SW Chan, F McOmish, B Irvine, ... Journal of general virology 74 (11), 2391-2399, 1993	1770	1993
The proximal origin of SARS-CoV-2 KG Andersen, A Rambaut, WI Lipkin, EC Holmes, RF Garry Nature medicine 26 (4), 450-452, 2020	1485	2020
Molecular Evolution: A Phylogenetic Approach RDM Page, EC Holmes Oxford University Press, 1998	1447*	1998
A proposed system for the nomenclature of hepatitis C viral genotypes P Simmonds, A Alberti, HJ Alter, F Bonino, DW Bradley, C Brechot, ... Hepatology 19 (5), 1321-1324, 1994	1272	1994
Rates of evolutionary change in viruses: patterns and determinants S Duffy, LA Shackelton, EC Holmes Nature Reviews Genetics 9 (4), 267-276, 2008	1181	2008
New world bats harbor diverse influenza A viruses S Tong, X Zhu, Y Li, M Shi, J Zhang, M Bourgeois, H Yang, X Chen, ... PLoS pathog 9 (10), e1003657, 2013	1143	2013
Unifying the epidemiological and evolutionary dynamics of pathogens BT Grenfell, OG Pybus, JR Gog, JLN Wood, JM Daly, JA Mumford, ... science 303 (5656), 327-332, 2004	1133	2004
HIV evolution: CTL escape mutation and reversion after transmission AJ Leslie, KJ Pfafferott, P Chetty, R Draenert, MM Addo, M Feeney, ... Nature medicine 10 (3), 282-289, 2004	949	2004
The genomic and epidemiological dynamics of human influenza A virus A Rambaut, OG Pybus, MI Nelson, C Viboud, JK Taubenberger, ... Nature 453 (7195), 615-619, 2008	902	2008
The causes and consequences of HIV evolution A Rambaut, D Posada, KA Crandall, EC Holmes Nature Reviews Genetics 5 (1), 52-61, 2004	709	2004
Comparative genomics reveals insights into avian genome evolution and adaptation G Zhang, C Li, Q Li, B Li, DM Larkin, C Lee, JF Storz, A Antunes, ... Science 346 (6215), 1311-1320, 2014	638	2014
Rates of molecular evolution in RNA viruses: a quantitative phylogenetic analysis GM Jenkins, A Rambaut, OG Pybus, EC Holmes Journal of molecular evolution 54 (2), 156-165, 2002	631	2002
The origin, emergence and evolutionary genetics of dengue virus EC Holmes, SS Twiddy Infection, genetics and evolution 3 (1), 19-28, 2003	625	2003
Evolutionary aspects of recombination in RNA viruses M Worobey, EC Holmes Journal of General Virology 80 (10), 2535-2543, 1999	607	1999
Redefining the invertebrate RNA virosphere M Shi, XD Lin, JH Tian, LJ Chen, X Chen, CX Li, XC Qin, J Li, JP Cao, ... Nature 540 (7634), 539-543, 2016	584	2016
Recombination within natural populations of pathogenic bacteria: short-term empirical estimates and long-term phylogenetic consequences EJ Feil, EC Holmes, DE Bessen, MS Chan, NPJ Day, MC Enright, ... Proceedings of the National Academy of Sciences 98 (1), 182-187, 2001	580	2001
Identifying SARS-CoV-2-related coronaviruses in Malayan pangolins TTY Lam, N Jia, YW Zhang, MHH Shum, JF Jiang, HC Zhu, YG Tong, ... Nature, 1-4, 2020	574*	2020

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