Edward C Holmes

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	All	Since 2016
Citations	85138	42763
h-index	142	88
i10-index	562	476

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Co-authors

Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk
Mang ShiSun Yat-sen UniversityVerified email at mail.sysu.edu.cn
Oliver PybusUniversity of Oxford / Royal Veterinary CollegeVerified email at zoo.ox.ac.uk
John-Sebastian EdenSenior Research Fellow; The Westmead Institute & University of SydneyVerified email at sydney.edu.au
Colin ParrishCornell UniversityVerified email at cornell.edu
Sebastian DucheneAustralian Research Council DECRA fellow, University of MelbourneVerified email at unimelb.edu.au
Bryan GrenfellKathryn Briger and Sarah Fenton Professor of Ecology and Public Affairs, Princeton UniversityVerified email at princeton.edu
Jemma L GeogheganUniversity of OtagoVerified email at otago.ac.nz
Tommy Tsan-Yuk LamThe University of Hong KongVerified email at hku.hk
Francesca Di GiallonardoPostdoctoral Research Fellow, University of New South WalesVerified email at kirby.unsw.edu.au
Andrew KitchenAssociate Professor of Anthropology, University of IowaVerified email at uiowa.edu
Jie CuiInstitut PasteurVerified email at ips.ac.cn
Siobain DuffyAssociate Professor, Dept Ecology, Evolution and Natural Resources, Rutgers UniversityVerified email at sebs.rutgers.edu
Mathieu FourmentUniversity of Technology SydneyVerified email at uts.edu.au
Cadhla FirthJames Cook UniversityVerified email at jcu.edu.au
Etienne Simon-LoriereInstitut PasteurVerified email at pasteur.fr
Michelle WilleSchool of Life and Environmental Science, University of SydneyVerified email at sydney.edu.au
Israel PaganCentro de Biotecnología y Genómica de Plantas (UPM-INIA)Verified email at upm.es
Maia RabaaOxford University Clinical Research Unit, HCMC, VietnamVerified email at oucru.org

Edward C Holmes

University of Sydney

Verified email at sydney.edu.au - Homepage

Evolutionary biology Virology


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Genomic characterisation and epidemiology of 2019 novel coronavirus: implications for virus origins and receptor binding R Lu, X Zhao, J Li, P Niu, B Yang, H Wu, W Wang, H Song, B Huang, ... The Lancet 395 (10224), 565-574, 2020	5881	2020
A new coronavirus associated with human respiratory disease in China F Wu, S Zhao, B Yu, YM Chen, W Wang, ZG Song, Y Hu, ZW Tao, JH Tian, ... Nature 579 (7798), 265-269, 2020	4196	2020
The proximal origin of SARS-CoV-2 KG Andersen, A Rambaut, WI Lipkin, EC Holmes, RF Garry Nature medicine 26 (4), 450-452, 2020	2243	2020
A metagenomic survey of microbes in honey bee colony collapse disorder DL Cox-Foster, S Conlan, EC Holmes, G Palacios, JD Evans, NA Moran, ... Science 318 (5848), 283-287, 2007	1852	2007
Classification of hepatitis C virus into six major genotypes and a series of subtypes by phylogenetic analysis of the NS-5 region P Simmonds, EC Holmes, TA Cha, SW Chan, F McOmish, B Irvine, ... Journal of general virology 74 (11), 2391-2399, 1993	1773	1993
Molecular Evolution: A Phylogenetic Approach RDM Page, EC Holmes Oxford University Press, 1998	1461*	1998
A proposed system for the nomenclature of hepatitis C viral genotypes P Simmonds, A Alberti, HJ Alter, F Bonino, DW Bradley, C Brechot, ... Hepatology 19 (5), 1321-1324, 1994	1274	1994
Rates of evolutionary change in viruses: patterns and determinants S Duffy, LA Shackelton, EC Holmes Nature Reviews Genetics 9 (4), 267-276, 2008	1229	2008
New world bats harbor diverse influenza A viruses S Tong, X Zhu, Y Li, M Shi, J Zhang, M Bourgeois, H Yang, X Chen, ... PLoS pathog 9 (10), e1003657, 2013	1196	2013
Unifying the epidemiological and evolutionary dynamics of pathogens BT Grenfell, OG Pybus, JR Gog, JLN Wood, JM Daly, JA Mumford, ... science 303 (5656), 327-332, 2004	1171	2004
HIV evolution: CTL escape mutation and reversion after transmission AJ Leslie, KJ Pfafferott, P Chetty, R Draenert, MM Addo, M Feeney, ... Nature medicine 10 (3), 282-289, 2004	963	2004
The genomic and epidemiological dynamics of human influenza A virus A Rambaut, OG Pybus, MI Nelson, C Viboud, JK Taubenberger, ... Nature 453 (7195), 615-619, 2008	924	2008
Identifying SARS-CoV-2-related coronaviruses in Malayan pangolins TTY Lam, N Jia, YW Zhang, MHH Shum, JF Jiang, HC Zhu, YG Tong, ... Nature, 1-4, 2020	858*	2020
The causes and consequences of HIV evolution A Rambaut, D Posada, KA Crandall, EC Holmes Nature Reviews Genetics 5 (1), 52-61, 2004	725	2004
Comparative genomics reveals insights into avian genome evolution and adaptation G Zhang, C Li, Q Li, B Li, DM Larkin, C Lee, JF Storz, A Antunes, ... Science 346 (6215), 1311-1320, 2014	681	2014
Redefining the invertebrate RNA virosphere M Shi, XD Lin, JH Tian, LJ Chen, X Chen, CX Li, XC Qin, J Li, JP Cao, ... Nature 540 (7634), 539-543, 2016	669	2016
Rates of molecular evolution in RNA viruses: a quantitative phylogenetic analysis GM Jenkins, A Rambaut, OG Pybus, EC Holmes Journal of molecular evolution 54 (2), 156-165, 2002	650	2002
The origin, emergence and evolutionary genetics of dengue virus EC Holmes, SS Twiddy Infection, genetics and evolution 3 (1), 19-28, 2003	637	2003
Evolutionary aspects of recombination in RNA viruses M Worobey, EC Holmes Journal of General Virology 80 (10), 2535-2543, 1999	623	1999
Cross-species virus transmission and the emergence of new epidemic diseases CR Parrish, EC Holmes, DM Morens, EC Park, DS Burke, CH Calisher, ... Microbiology and Molecular Biology Reviews 72 (3), 457-470, 2008	597	2008

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