Multi-omics enrichment analysis using the GeneTrail2 web service D Stöckel, T Kehl, P Trampert, L Schneider, C Backes, N Ludwig, ... Bioinformatics 32 (10), 1502-1508, 2016 | 165 | 2016 |
GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments A Keller, C Backes, M Al-Awadhi, A Gerasch, J Küntzer, O Kohlbacher, ... BMC bioinformatics 9 (1), 552, 2008 | 100 | 2008 |
FASIMU: flexible software for flux-balance computation series in large metabolic networks A Hoppe, S Hoffmann, A Gerasch, C Gille, HG Holzhutter BMC bioinformatics 12 (1), 28, 2011 | 95 | 2011 |
An integer linear programming approach for finding deregulated subgraphs in regulatory networks C Backes, A Rurainski, GW Klau, O Müller, D Stöckel, A Gerasch, ... Nucleic Acids Research, 2011 | 88 | 2011 |
A novel algorithm for detecting differentially regulated paths based on gene set enrichment analysis A Keller, C Backes, A Gerasch, M Kaufmann, O Kohlbacher, E Meese, ... Bioinformatics 25 (21), 2787, 2009 | 65 | 2009 |
miRTrail-a comprehensive webserver for analyzing gene and miRNA patterns to enhance the understanding of regulatory mechanisms in diseases C Laczny, P Leidinger, J Haas, N Ludwig, C Backes, A Gerasch, ... BMC bioinformatics 13 (1), 36, 2012 | 52 | 2012 |
BiNA: a visual analytics tool for biological network data A Gerasch, D Faber, J Küntzer, P Niermann, O Kohlbacher, HP Lenhof, ... PloS one 9 (2), e87397, 2014 | 50 | 2014 |
BNDB–the biochemical network database J Küntzer, C Backes, T Blum, A Gerasch, M Kaufmann, O Kohlbacher, ... BMC bioinformatics 8 (1), 367, 2007 | 49 | 2007 |
Linear-Time Algorithms for Hole-Free Rectilinear Proportional Contact Graph Representations M Alam, T Biedl, S Felsner, A Gerasch, M Kaufmann, S Kobourov Algorithms and Computation, 281-291, 2011 | 38 | 2011 |
BN++-a biological information system J Küntzer, T Blum, A Gerasch, C Backes, A Hildebrandt, M Kaufmann, ... J Integr Bioinformatics 3 (2), 34, 2006 | 34 | 2006 |
NetworkTrail—a web service for identifying and visualizing deregulated subnetworks D Stöckel, O Müller, T Kehl, A Gerasch, C Backes, A Rurainski, A Keller, ... Bioinformatics 29 (13), 1702-1703, 2013 | 18 | 2013 |
Linear-time algorithms for proportional contact graph representations MJ Alam, T Biedl, S Felsner, A Gerasch, M Kaufmann, SG Kobourov Technical Report CS-2011-19, 2011 | 15* | 2011 |
Drug T arget I nspector: An assistance tool for patient treatment stratification L Schneider, D Stöckel, T Kehl, A Gerasch, N Ludwig, P Leidinger, ... International journal of cancer 138 (7), 1765-1776, 2016 | 14 | 2016 |
Boundary labeling methods for dynamic focus regions N Heinsohn, A Gerasch, M Kaufmann 2014 IEEE Pacific Visualization Symposium, 243-247, 2014 | 11 | 2014 |
Rebuilding KEGG maps: Algorithms and benefits A Gerasch, M Kaufmann, O Kohlbacher 2014 IEEE Pacific Visualization Symposium, 97-104, 2014 | 5 | 2014 |
Network-based interactive navigation and analysis of large biological datasets A Gerasch, J Küntzer, P Niermann, D Stöckel, M Kaufmann, O Kohlbacher, ... it-Information Technology 57 (1), 37-48, 2015 | 2 | 2015 |
Visuelle Analytik biologischer Daten K Nieselt, M Kaufmann, A Gerasch, HP Lenhof, M Spehr, S Hesse, ... Informatik-Spektrum, 1-10, 2010 | | 2010 |
BN++-A Biological Information System HP Lenhof, O Kohlbacher, M Kaufmann, A Hildebrandt, C Backes, ... http://journal. imbio. de/index. php? paper_id= 34, 2006 | | 2006 |
Linear-Time Algorithms for Rectilinear Hole-free Proportional Contact Representations MJ Alam, T Biedl, S Felsner, A Gerasch, M Kaufmann, SG Kobourov | | |