|Integrative transcriptomics analysis of lung epithelial cells and identification of repurposable drug candidates for COVID-19|
T Islam, MR Rahman, B Aydin, H Beklen, KY Arga, M Shahjaman
European Journal of Pharmacology 887, 173594, 2020
|Pan-cancer mapping of differential protein-protein interactions|
G Gulfidan, B Turanli, H Beklen, R Sinha, KY Arga
Scientific reports 10 (1), 3272, 2020
|Drug repositioning for P-glycoprotein mediated co-expression networks in colorectal cancer|
H Beklen, G Gulfidan, KY Arga, A Mardinoglu, B Turanli
Frontiers in oncology 10, 1273, 2020
|Higher proteotoxic stress rather than mitochondrial damage is involved in higher neurotoxicity of bortezomib compared to carfilzomib|
AT Jannuzzi, S Arslan, AM Yilmaz, G Sari, H Beklen, L Méndez, ...
Redox biology 32, 101502, 2020
|Systems biomarkers for papillary thyroid cancer prognosis and treatment through multi-omics networks|
G Gulfidan, M Soylu, D Demirel, HBC Erdonmez, H Beklen, PO Sarica, ...
Archives of Biochemistry and Biophysics 715, 109085, 2022
|The repertoire of glycan alterations and glycoproteins in human cancers|
M Kori, B Aydin, G Gulfidan, H Beklen, N Kelesoglu, A Caliskan Iscan, ...
OMICS: A Journal of Integrative Biology 25 (3), 139-168, 2021
|Artificial intelligence as accelerator for genomic medicine and planetary health|
G Gulfidan, H Beklen, KY Arga
OMICS: A Journal of Integrative Biology 25 (12), 745-749, 2021
|Differential protein interactome in esophageal squamous cell carcinoma offers novel systems biomarker candidates with high diagnostic and prognostic performance|
G Gulfidan, H Beklen, I Sinha, F Kucukalp, B Caloglu, I Esen, B Turanli, ...
OMICS: A Journal of Integrative Biology 25 (8), 495-512, 2021
|Systems-level biomarkers identification and drug repositioning in colorectal cancer|
H Beklen, E Yildirim, M Kori, B Turanli, KY Arga
World Journal of Gastrointestinal Oncology 13 (7), 638, 2021
|Differential Interactome Based Drug Repositioning Unraveled Abacavir, Exemestane, Nortriptyline Hydrochloride, and Tolcapone as Potential Therapeutics for Colorectal Cancers|
H Beklen, S Arslan, G Gulfidan, B Turanli, P Ozbek, B Karademir Yilmaz, ...
Frontiers in Bioinformatics 1, 710591, 2021
|Epigenomic and transcriptomic landscaping unraveled candidate repositioned therapeutics for non-functioning pituitary neuroendocrine tumors|
B Aydin, H Beklen, KY Arga, F Bayrakli, B Turanli
Journal of Endocrinological Investigation, 1-21, 2022
H Beklen, E Yildirim, M Kori, B Turanli, KY Arga, W Sano, F Inoue, ...