David Konerding
David Konerding
google.com
Verified email at konerding.com
Title
Cited by
Cited by
Year
Massively multitask networks for drug discovery
B Ramsundar, S Kearnes, P Riley, D Webster, D Konerding, V Pande
arXiv preprint arXiv:1502.02072, 2015
3862015
Cloud-based simulations on Google Exacycle reveal ligand modulation of GPCR activation pathways
KJ Kohlhoff, D Shukla, M Lawrenz, GR Bowman, DE Konerding, D Belov, ...
Nature chemistry 6 (1), 15, 2014
3542014
Relaxation of backbone bond geometry improves protein energy landscape modeling
P Conway, MD Tyka, F DiMaio, DE Konerding, D Baker
Protein Science 23 (1), 47-55, 2014
1812014
The Grid2003 production Grid: Principles and practice
I Foster, J Gieraltowski, S Gose, N Maltsev, E May, A Rodriguez, ...
High performance Distributed Computing, 2004. Proceedings. 13th IEEE …, 2004
1642004
Restrained molecular dynamics of solvated duplex DNA using the particle mesh Ewald method
DE Konerding, TE Cheatham, PA Kollman, TL James
Journal of biomolecular NMR 13 (2), 119-131, 1999
391999
NMR structure of a gemcitabine-substituted model Okazaki fragment
D Konerding, TL James, E Trump, AM Soto, LA Marky, WH Gmeiner
Biochemistry 41 (3), 839-846, 2002
262002
Effect of cytarabine on the NMR structure of a model Okazaki fragment from the SV40 genome
WH Gmeiner, D Konerding, TL James
Biochemistry 38 (4), 1166-1175, 1999
261999
Science in the cloud: accelerating discovery in the 21st century
JL Hellerstein, KJ Kohlhoff, DE Konerding
IEEE internet computing 16 (4), 64-68, 2012
222012
Shape-selective recognition of a model Okazaki fragment by geometrically-constrained bis-distamycins
WH Gmeiner, W Cui, DE Konerding, PA Keifer, SK Sharma, AM Soto, ...
Journal of Biomolecular Structure and Dynamics 17 (3), 507-518, 1999
191999
Opportunistic job processing in a distributed computer environment
D Konerding, JM Breckenridge, D Belov
US Patent 8,935,318, 2015
162015
Essential grid workflow monitoring elements
DK Gunter, KR Jackson, DE Konerding, JR Lee, BL Tierney
Ernest Orlando Lawrence Berkeley NationalLaboratory, Berkeley, CA (US), 2005
152005
Massively multitask networks for drug discovery. arXiv 2015
B Ramsundar, S Kearnes, P Riley, D Webster, D Konerding, V Pande
arXiv preprint arXiv:1502.02072, 0
15
Enabling distributed petascale science
A Baranovski, S Bharathi, J Bresnahan, A Chervenak, I Foster, D Fraser, ...
Journal of Physics: Conference Series 78 (1), 012020, 2007
142007
Massively multitask networks for drug discovery (2015)
B Ramsundar, S Kearnes, P Riley, D Webster, D Konerding, V Pande
arXiv preprint arXiv:1502.02072, 2018
92018
Computational structural genomics of a complete minimal organism
JM Chandonia, DE Konerding, DG Allen, IG Choi, H Yokota, SE Brenner
Genome Informatics 13, 390-391, 2002
52002
Science in the cloud
JL Hellerstein, K Kohlhoff, DE Konerding
32012
An essential guide to the basic local alignment search tool: blast
D Konerding
Briefings in Bioinformatics 5 (1), 93-94, 2004
32004
Cloud-based simulations on Google Exacycle reveal ligand modulation of GPCR activation pathways. Nat Chem 6: 15–21
KJ Kohlhoff, D Shukla, M Lawrenz, GR Bowman, DE Konerding, D Belov, ...
31821
Opportunistic job Processing of input data divided into partitions of different sizes
D Konerding, JM Breckenridge, D Belov
US Patent 9,535,765, 2017
22017
Online programming of operator interface panel
V Vaidya, R Husman, RK Tiwari
US Patent App. 10/354,748, 2009
22009
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