Katharina Hoff
Katharina Hoff
Bestätigte E-Mail-Adresse bei uni-greifswald.de - Startseite
Titel
Zitiert von
Zitiert von
Jahr
Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
KK Dasmahapatra, JR Walters, AD Briscoe, JW Davey, A Whibley, ...
Nature 487, 94-98, 2012
8602012
BRAKER1: unsupervised RNA-Seq-based genome annotation with GeneMark-ET and AUGUSTUS
KJ Hoff, S Lange, A Lomsadze, M Borodovsky, M Stanke
Bioinformatics 32 (5), 767-769, 2016
3942016
Finding the missing honey bee genes: lessons learned from a genome upgrade
CG Elsik, KC Worley, AK Bennett, M Beye, F Camara, CP Childers, ...
BMC genomics 15 (1), 86, 2014
2852014
The genomes of two key bumblebee species with primitive eusocial organization
BM Sadd, SM Barribeau, G Bloch, DC De Graaf, P Dearden, CG Elsik, ...
Genome biology 16 (1), 1-32, 2015
2182015
WebAUGUSTUS—a web service for training AUGUSTUS and predicting genes in eukaryotes
KJ Hoff, M Stanke
Nucleic acids research 41 (W1), W123-W128, 2013
1572013
Orphelia: predicting genes in metagenomic sequencing reads
KJ Hoff, T Lingner, P Meinicke, M Tech
Nucleic acids research 37 (suppl_2), W101-W105, 2009
1342009
Gene prediction in metagenomic fragments: a large scale machine learning approach
KJ Hoff, M Tech, T Lingner, R Daniel, B Morgenstern, P Meinicke
BMC bioinformatics 9 (1), 217, 2008
1152008
The effect of sequencing errors on metagenomic gene prediction
KJ Hoff
BMC genomics 10 (1), 520, 2009
1142009
Verticillium transcription activator of adhesion Vta2 suppresses microsclerotia formation and is required for systemic infection of plant roots
VT Tran, SA Braus‐Stromeyer, H Kusch, M Reusche, A Kaever, A Kühn, ...
New Phytologist 202 (2), 565-581, 2014
702014
Whole-Genome Annotation with BRAKER
KJ Hoff, A Lomsadze, M Borodovsky, M Stanke
Methods in Molecular Biology 1962, 65-95, 2019
382019
Mitigating Anticipated Effects of Systematic Errors Supports Sister-Group Relationship between Xenacoelomorpha and Ambulacraria
H Philippe, AJ Poustka, M Chiodin, KJ Hoff, C Dessimoz, B Tomiczek, ...
Current Biology, 2019
302019
Predicting genes in single genomes with augustus
KJ Hoff, M Stanke
Current protocols in bioinformatics 65 (1), e57, 2019
292019
The nervous system of Xenacoelomorpha: a genomic perspective
E Perea-Atienza, B Gavilán, M Chiodin, JF Abril, KJ Hoff, AJ Poustka, ...
Journal of Experimental Biology 218 (4), 618-628, 2015
292015
Current methods for automated annotation of protein-coding genes
KJ Hoff, M Stanke
Current Opinion in insect science 7, 8-14, 2015
192015
MakeHub: Fully automated generation of UCSC genome browser assembly hubs
KJ Hoff
Genomics, proteomics & bioinformatics 17 (5), 546-549, 2019
32019
VARUS: Sampling Complementary RNA Reads from the Sequence Read Archive
M Stanke, W Bruhn, F Becker, KJ Hoff
BMC Bioinformatics 20 (558), https://doi.org/10.1101/608737, 2019
32019
BRAKER2: incorporating protein homology information into gene prediction with GeneMark-EP and AUGUSTUS
KJ Hoff, A Lomsadze, M Stanke, M Borodovsky
Plant and Animal Genomes XXVI, 2018
32018
Basic statistics
KJ Hoff
32010
Gene prediction in metagenomic sequencing reads
KJ Hoff
Niedersächsische Staats-und Universitätsbibliothek Göttingen, 2009
32009
Non-invasive and label-free 3D-visualization shows in vivo oligomerization of the staphylococcal alkaline shock protein 23 (Asp23)
I Petersen, R Schlüter, KJ Hoff, V Liebscher, G Bange, K Riedel, ...
Scientific reports 10 (1), 1-7, 2020
22020
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