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Eric T. Dawson
Eric T. Dawson
Verified email at nvidia.com - Homepage
Title
Cited by
Cited by
Year
Variation graph toolkit improves read mapping by representing genetic variation in the reference
E Garrison, J Sirén, AM Novak, G Hickey, JM Eizenga, ET Dawson, ...
Nature biotechnology 36 (9), 875-879, 2018
3392018
ReactomeFIViz: the Reactome FI Cytoscape app for pathway and network-based data analysis
Guanming Wu, Eric Dawson, Adrian Duong, Robin Haw, Lincoln Stein
F1000Research 3, 2014
2002014
Genotyping structural variants in pangenome graphs using the vg toolkit
G Hickey, D Heller, J Monlong, JA Sibbesen, J Sirén, J Eizenga, ...
Genome biology 21 (1), 1-17, 2020
1002020
Predicting evolutionary site variability from structure in viral proteins: buriedness, packing, flexibility, and design
A Shahmoradi, DK Sydykova, SJ Spielman, EL Jackson, ET Dawson, ...
Journal of molecular evolution 79 (3), 130-142, 2014
472014
Cross-species comparison of site-specific evolutionary-rate variation in influenza haemagglutinin
AG Meyer, ET Dawson, CO Wilke
Philosophical Transactions of the Royal Society B: Biological Sciences 368 …, 2013
362013
Radiation-related genomic profile of papillary thyroid carcinoma after the Chernobyl accident
LM Morton, DM Karyadi, C Stewart, TI Bogdanova, ET Dawson, ...
Science 372 (6543), eabg2538, 2021
342021
Sequence variation aware genome references and read mapping with the variation graph toolkit
E Garrison, J Sirén, AM Novak, G Hickey, JM Eizenga, ET Dawson, ...
BioRxiv, 234856, 2017
332017
Vcflib and tools for processing the VCF variant call format
E Garrison, ZN Kronenberg, ET Dawson, BS Pedersen, P Prins
BioRxiv, 2021
252021
Limited utility of residue masking for positive-selection inference
SJ Spielman, ET Dawson, CO Wilke
Molecular biology and evolution 31 (9), 2496-2500, 2014
142014
SVCurator: a crowdsourcing app to visualize evidence of structural variants for the human genome
LM Chapman, N Spies, P Pai, CS Lim, A Carroll, G Narzisi, CM Watson, ...
BioRxiv, 581264, 2019
42019
GFAKluge: A C++ library and command line utilities for the Graphical Fragment Assembly formats
ET Dawson, R Durbin
Journal of open source software 4 (33), 2019
42019
ReactomeFIViz: a Cytoscape app for pathway and network-based data analysis. F1000Res. 2014; 3: 146
G Wu, E Dawson, A Duong, R Haw, L Stein
4
An international virtual hackathon to build tools for the analysis of structural variants within species ranging from coronaviruses to vertebrates
AM Mc Cartney, M Mahmoud, M Jochum, DP Agustinho, B Zorman, ...
F1000Research 10, 2021
22021
Viral coinfection analysis using a MinHash toolkit
ET Dawson, S Wagner, D Roberson, M Yeager, J Boland, E Garrison, ...
BMC bioinformatics 20 (1), 1-10, 2019
22019
A spectrum of free software tools for processing the VCF variant call format: vcflib, bio-vcf, cyvcf2, hts-nim and slivar
E Garrison, ZN Kronenberg, ET Dawson, BS Pedersen, P Prins
PLOS Computational Biology 18 (5), e1009123, 2022
12022
A crowdsourced set of curated structural variants for the human genome
LM Chapman, N Spies, P Pai, CS Lim, A Carroll, G Narzisi, CM Watson, ...
PLoS computational biology 16 (6), e1007933, 2020
12020
rkmh: a MinHash toolbox for analyzing HPV coinfections
ET Dawson, S Wagner, D Roberson, M Yeager, J Boland, E Garrison, ...
Cancer Research 78 (13_Supplement), 3273-3273, 2018
12018
Accelerating Minimap2 for accurate long read alignment on GPUs
M Maric, E Dawson, V Iyer, J Israeli, S Narayanasamy
2022
Accelerating Minimap2 for accurate long read alignment on GPUs
H Sadasivan, M Maric, E Dawson, V Iyer, J Israeli, S Narayanasamy
bioRxiv, 2022
2022
Global analysis of human SARS-CoV-2 infection and host-virus interaction
M Ferrarini, V Aguiar-Pulido, E Dawson, A Guarracino, A Gruber, ...
2022
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