Aindrila Mukhopadhyay
Title
Cited by
Cited by
Year
Engineering microbial biofuel tolerance and export using efflux pumps
MJ Dunlop, ZY Dossani, HL Szmidt, HC Chu, TS Lee, JD Keasling, ...
Molecular systems biology 7 (1), 2011
4222011
Biofuel alternatives to ethanol: pumping the microbial well
JL Fortman, S Chhabra, A Mukhopadhyay, H Chou, TS Lee, E Steen, ...
Trends in biotechnology 26 (7), 375-381, 2008
4162008
Identification and microbial production of a terpene-based advanced biofuel
PP Peralta-Yahya, M Ouellet, R Chan, A Mukhopadhyay, JD Keasling, ...
Nature communications 2, 483, 2011
4082011
Engineering dynamic pathway regulation using stress-response promoters
RH Dahl, F Zhang, J Alonso-Gutierrez, E Baidoo, TS Batth, ...
Nature biotechnology 31 (11), 1039, 2013
3202013
Modular engineering of L-tyrosine production in Escherichia coli
D Juminaga, EEK Baidoo, AM Redding-Johanson, TS Batth, H Burd, ...
Appl. Environ. Microbiol. 78 (1), 89-98, 2012
2222012
Functional genomic study of exogenous n-butanol stress in Escherichia coli
BJ Rutherford, RH Dahl, RE Price, HL Szmidt, PI Benke, A Mukhopadhyay, ...
Appl. Environ. Microbiol. 76 (6), 1935-1945, 2010
2102010
Salt stress in Desulfovibrio vulgaris Hildenborough: an integrated genomics approach
A Mukhopadhyay, Z He, EJ Alm, AP Arkin, EE Baidoo, SC Borglin, ...
Journal of bacteriology 188 (11), 4068-4078, 2006
1612006
4.0- resolution cryo-EM structure of the mammalian chaperonin TRiC/CCT reveals its unique subunit arrangement
Y Cong, ML Baker, J Jakana, D Woolford, EJ Miller, S Reissmann, ...
Proceedings of the National Academy of Sciences 107 (11), 4967-4972, 2010
1542010
Targeted proteomics for metabolic pathway optimization: application to terpene production
AM Redding-Johanson, TS Batth, R Chan, R Krupa, HL Szmidt, ...
Metabolic engineering 13 (2), 194-203, 2011
1492011
Enhancing fatty acid production by the expression of the regulatory transcription factor FadR
F Zhang, M Ouellet, TS Batth, PD Adams, CJ Petzold, A Mukhopadhyay, ...
Metabolic engineering 14 (6), 653-660, 2012
1462012
Importance of systems biology in engineering microbes for biofuel production
A Mukhopadhyay, AM Redding, BJ Rutherford, JD Keasling
Current opinion in biotechnology 19 (3), 228-234, 2008
1452008
How sulphate-reducing microorganisms cope with stress: lessons from systems biology
J Zhou, Q He, CL Hemme, A Mukhopadhyay, K Hillesland, A Zhou, Z He, ...
Nature Reviews Microbiology 9 (6), 452-466, 2011
1312011
Dynamic cyanobacterial response to hydration and dehydration in a desert biological soil crust
L Rajeev, UN Da Rocha, N Klitgord, EG Luning, J Fortney, SD Axen, ...
The ISME journal 7 (11), 2178-2191, 2013
1302013
Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis
HT Parsons, K Christiansen, B Knierim, A Carroll, J Ito, TS Batth, ...
Plant physiology 159 (1), 12-26, 2012
1302012
Analysis of the Arabidopsis Cytosolic Proteome Highlights Subcellular Partitioning of Central Plant Metabolism
J Ito, TS Batth, CJ Petzold, AM Redding-Johanson, A Mukhopadhyay, ...
Journal of proteome research 10 (4), 1571-1582, 2011
1212011
A thermophilic ionic liquid-tolerant cellulase cocktail for the production of cellulosic biofuels
JI Park, EJ Steen, H Burd, SS Evans, AM Redding-Johnson, T Batth, ...
PloS one 7 (5), 2012
1202012
A model for improving microbial biofuel production using a synthetic feedback loop
MJ Dunlop, JD Keasling, A Mukhopadhyay
Systems and synthetic biology 4 (2), 95-104, 2010
1192010
Impact of ionic liquid pretreated plant biomass on Saccharomyces cerevisiae growth and biofuel production
M Ouellet, S Datta, DC Dibble, PR Tamrakar, PI Benke, C Li, S Singh, ...
Green Chemistry 13 (10), 2743-2749, 2011
1172011
Biosynthesis and incorporation of side‐chain‐truncated lignin monomers to reduce lignin polymerization and enhance saccharification
A Eudes, A George, P Mukerjee, JS Kim, B Pollet, PI Benke, F Yang, ...
Plant biotechnology journal 10 (5), 609-620, 2012
1122012
Cell-wide responses to low-oxygen exposure in Desulfovibrio vulgaris Hildenborough
A Mukhopadhyay, AM Redding, MP Joachimiak, AP Arkin, SE Borglin, ...
Journal of bacteriology 189 (16), 5996-6010, 2007
1122007
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