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Robert Olson
Robert Olson
Verified email at mcs.anl.gov
Title
Cited by
Cited by
Year
The RAST Server: rapid annotations using subsystems technology
RK Aziz, D Bartels, AA Best, M DeJongh, T Disz, RA Edwards, K Formsma, ...
BMC genomics 9 (1), 1-15, 2008
100452008
The metagenomics RAST server–a public resource for the automatic phylogenetic and functional analysis of metagenomes
F Meyer, D Paarmann, M D'Souza, R Olson, EM Glass, M Kubal, ...
BMC bioinformatics 9 (1), 1-8, 2008
36542008
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)
R Overbeek, R Olson, GD Pusch, GJ Olsen, JJ Davis, T Disz, RA Edwards, ...
Nucleic acids research 42 (D1), D206-D214, 2014
35672014
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes
R Overbeek, T Begley, RM Butler, JV Choudhuri, HY Chuang, M Cohoon, ...
Nucleic acids research 33 (17), 5691-5702, 2005
21142005
RASTtk: a modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes
T Brettin, JJ Davis, T Disz, RA Edwards, S Gerdes, GJ Olsen, R Olson, ...
Scientific reports 5 (1), 1-6, 2015
15912015
PATRIC, the bacterial bioinformatics database and analysis resource
AR Wattam, D Abraham, O Dalay, TL Disz, T Driscoll, JL Gabbard, ...
Nucleic acids research 42 (D1), D581-D591, 2014
11582014
Improvements to PATRIC, the all-bacterial bioinformatics database and analysis resource center
AR Wattam, JJ Davis, R Assaf, S Boisvert, T Brettin, C Bun, N Conrad, ...
Nucleic acids research 45 (D1), D535-D542, 2017
11482017
The marine viromes of four oceanic regions
FE Angly, B Felts, M Breitbart, P Salamon, RA Edwards, C Carlson, ...
PLoS biology 4 (11), e368, 2006
10852006
Functional metagenomic profiling of nine biomes
EA Dinsdale, RA Edwards, D Hall, F Angly, M Breitbart, JM Brulc, ...
Nature 452 (7187), 629-632, 2008
10662008
KBase: the United States department of energy systems biology knowledgebase
AP Arkin, RW Cottingham, CS Henry, NL Harris, RL Stevens, S Maslov, ...
Nature biotechnology 36 (7), 566-569, 2018
6142018
The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities
JJ Davis, AR Wattam, RK Aziz, T Brettin, R Butler, RM Butler, P Chlenski, ...
Nucleic acids research 48 (D1), D606-D612, 2020
4552020
The Aurora or-parallel Prolog system
E Lusk, R Butler, T Disz, R Olson, R Overbeek, R Stevens, DHD Warren, ...
New Generation Computing 7 (2), 243-271, 1990
4261990
Access grid: Immersive group-to-group collaborative visualization
L Childers, T Disz, R Olson, ME Papka, R Stevens, T Udeshi
Argonne National Lab., IL (US), 2000
2402000
SEED servers: high-performance access to the SEED genomes, annotations, and metabolic models
RK Aziz, S Devoid, T Disz, RA Edwards, CS Henry, GJ Olsen, R Olson, ...
PloS one 7 (10), e48053, 2012
1852012
Antimicrobial resistance prediction in PATRIC and RAST
JJ Davis, S Boisvert, T Brettin, RW Kenyon, C Mao, R Olson, R Overbeek, ...
Scientific reports 6 (1), 1-12, 2016
1682016
Productive parallel programming: The PCN approach
I Foster, R Olson, S Tuecke
Scientific Programming 1 (1), 51-66, 1992
1601992
Using Machine Learning To Predict Antimicrobial MICs and Associated Genomic Features for Nontyphoidal Salmonella
M Nguyen, SW Long, PF McDermott, RJ Olsen, R Olson, RL Stevens, ...
Journal of clinical microbiology 57 (2), e01260-18, 2019
1402019
Database for mobile group II introns
L Dai, N Toor, R Olson, A Keeping, S Zimmerly
Nucleic acids research 31 (1), 424-426, 2003
1382003
Scalable performance environments for parallel systems
DA Reed, RD Olsen, RA Aydt, TM Madhyastha, T Birkett, DW Jensen, ...
Department of Computer Science, University of Illinois at Urbana-Champaign, 1991
1331991
Accessing the SEED genome databases via Web services API: tools for programmers
T Disz, S Akhter, D Cuevas, R Olson, R Overbeek, V Vonstein, R Stevens, ...
BMC bioinformatics 11 (1), 1-11, 2010
1262010
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Articles 1–20