| Using the Hough transform to segment ultrasound images of longitudinal and transverse sections of the carotid artery S Golemati, J Stoitsis, EG Sifakis, T Balkizas, KS Nikita Ultrasound in medicine & biology 33 (12), 1918-1932, 2007 | 217 | 2007 |
| PARP1-and CTCF-mediated interactions between active and repressed chromatin at the lamina promote oscillating transcription H Zhao, EG Sifakis, N Sumida, L Millán-Ariño, BA Scholz, JP Svensson, ... Molecular cell 59 (6), 984-997, 2015 | 150 | 2015 |
| WNT signaling and AHCTF1 promote oncogenic MYC expression through super-enhancer-mediated gene gating BA Scholz, N Sumida, CDM de Lima, I Chachoua, M Martino, I Tzelepis, ... Nature Genetics 51 (12), 1723-1731, 2019 | 79 | 2019 |
| STAT3 activity promotes programmed-death ligand 1 expression and suppresses immune responses in breast cancer I Zerdes, M Wallerius, EG Sifakis, T Wallmann, S Betts, M Bartish, ... Cancers 11 (10), 1479, 2019 | 72 | 2019 |
| The long-term prognostic and predictive capacity of cyclin D1 gene amplification in 2305 breast tumours A Lundberg, LS Lindström, J Li, JC Harrell, E Darai-Ramqvist, EG Sifakis, ... Breast Cancer Research 21 (1), 34, 2019 | 60 | 2019 |
| Correlation between contrast-enhanced ultrasound characteristics (qualitative and quantitative) and pathological prognostic factors in breast cancer I Vraka, E Panourgias, E Sifakis, A Koureas, P Galanis, D Dellaportas, ... in vivo 32 (4), 945-954, 2018 | 37 | 2018 |
| Programmed death‐ligand 1 gene expression is a prognostic marker in early breast cancer and provides additional prognostic value to 21‐gene and 70‐gene signatures in estrogen … I Zerdes, EG Sifakis, A Matikas, S Chrétien, NP Tobin, J Hartman, ... Molecular oncology 14 (5), 951-963, 2020 | 22 | 2020 |
| Robust carotid artery recognition in longitudinal B-mode ultrasound images EG Sifakis, S Golemati IEEE transactions on image processing 23 (9), 3762-3772, 2014 | 22 | 2014 |
| Evaluating the effect of various background correction methods regarding noise reduction, in two-channel microarray data EG Sifakis, A Prentza, D Koutsouris, AA Chatziioannou Computers in biology and medicine 42 (1), 19-29, 2012 | 15 | 2012 |
| PD-1 protein and gene expression as prognostic factors in early breast cancer A Matikas, I Zerdes, J Lövrot, E Sifakis, F Richard, C Sotiriou, ... ESMO open 5 (6), e001032, 2020 | 14 | 2020 |
| Elucidating the identity of resistance mechanisms to prednisolone exposure in acute lymphoblastic leukemia cells through transcriptomic analysis: A computational approach EG Sifakis, GI Lambrou, A Prentza, S Vlahopoulos, D Koutsouris, ... Journal of clinical bioinformatics 1, 1-21, 2011 | 14 | 2011 |
| MYC as a driver of stochastic chromatin networks: implications for the fitness of cancer cells N Sumida, EG Sifakis, NA Kiani, AL Ronnegren, BA Scholz, J Vestlund, ... Nucleic Acids Research 48 (19), 10867-10876, 2020 | 9 | 2020 |
| Identifying gender independent biomarkers responsible for human muscle aging using microarray data EG Sifakis, I Valavanis, O Papadodima, AA Chatziioannou 13th IEEE International Conference on BioInformatics and BioEngineering, 1-5, 2013 | 9 | 2013 |
| The ultra-sensitive Nodewalk technique identifies stochastic from virtual, population-based enhancer hubs regulating MYC in 3D: Implications for the fitness of … N Sumida, EG Sifakis, BA Scholz, A Fernandez-Woodbridge, NA Kiani, ... bioRxiv, 286583, 2018 | 8 | 2018 |
| A composite framework for the statistical analysis of epidemiological DNA methylation data with the Infinium human Methylation 450K BeadChip I Valavanis, EG Sifakis, P Georgiadis, S Kyrtopoulos, AA Chatziioannou IEEE Journal of Biomedical and Health Informatics 18 (3), 817-823, 2014 | 7 | 2014 |
| Breast cancer patient-derived whole-tumor cell culture model for efficient drug profiling and treatment response prediction X Chen, EG Sifakis, S Robertson, SY Neo, SH Jun, L Tong, AT Hui Min, ... Proceedings of the National Academy of Sciences 120 (1), e2209856120, 2023 | 4 | 2023 |
| cDNA microarray analysis of a glucocorticoid treated acute lymphoblastic leukemia cell line EG Sifakis, GI Lambrou, A Prentza, D Koutsouris, ... 2008 8th IEEE International Conference on BioInformatics and BioEngineering, 1-6, 2008 | 4 | 2008 |
| Comparative computational methods for identification of inherent or acquired mechanisms of resistance to prednisolone in Acute Lymphoblastic Leukemia cells GI Lambrou, EG Sifakis, A Prentza, A Chatziioannou, D Koutsouris, ... 2009 9th International Conference on Information Technology and Applications …, 2009 | 2 | 2009 |
| Prediction of fetal acidemia based on the very low frequency components of the fetal heart rate and fetal pulse oximetry recordings during labor G Vasios, A Prentza, E Sifakis, P Thomopoulos, E Salamalekis, ... The International Special Topic Conference on Information Technology in …, 2006 | 2 | 2006 |
| Derivation of Cancer Related Biomarkers from DNA Methylation Data from an Epidemiological Cohort I Valavanis, EG Sifakis, P Georgiadis, S Kyrtopoulos, AA Chatziioannou Engineering Applications of Neural Networks: 14th International Conference …, 2013 | 1 | 2013 |
Ioannis ZerdesDepartment of Oncology-Pathology, Karolinska Institute, Stockholm, SwedenBestätigte E-Mail-Adresse bei ki.se
